Pre_GI: SWBIT SVG BLASTN

Query: NC_015707:1911431 Thermotoga thermarum DSM 5069 chromosome, complete genome

Lineage: Thermotoga thermarum; Thermotoga; Thermotogaceae; Thermotogales; Thermotogae; Bacteria

General Information: Country: Djibouti; Isolation: Continental solfataric spring; Africa; Temp: Hyperthermophile; Temp: 80C. This organism, a member of the Thermotogales, has the characteristic morphology of one or more cells contained in a sheath-like envelope which extends beyond the cell wall. Preliminary sequencing of Thermotogales genomes has identified extensive horizontal gene transfer between these organisms and the Archaea. Thermotoga thermarum does not grow at high salt concentrations (>0.6% NaCL). This organism also produces heat stable enzymes such as endoxylanase, beta xylosidase and alpha arabinofuranosidase which may have commercial uses.

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BLASTN Alignment.txt

Subject: NC_012850:4422966 Rhizobium leguminosarum bv. trifolii WSM1325, complete genome

Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.