Pre_GI: SWBIT SVG BLASTN

Query: NC_014921:313312 Mycoplasma fermentans M64 chromosome, complete genome

Lineage: Mycoplasma fermentans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: Mycoplasma fermentans has been isolated from the respiratory and urogenital tract, primarily from immunocompromised patients and may be a factor in the progression of HIV infection to AIDS. In addition this organism can be detected in the blood and joints of patients with rheumatoid arthritis.

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BLASTN Alignment.txt

Subject: NC_010673:388442 Borrelia hermsii DAH, complete genome

Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.