Pre_GI: SWBIT SVG BLASTN

Query: NC_014169:2466442 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.

- Sequence; - BLASTN hit (Low score = Light, High score = Dark)
- hypothetical protein; - cds: hover for description

BLASTN Alignment.txt

Subject: NC_012803:3691 Micrococcus luteus NCTC 2665, complete genome

Lineage: Micrococcus luteus; Micrococcus; Micrococcaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Micrococcus luteus NCTC 2665 has potential in bioremediation due to its ability to sequester metals (i.e. gold and strontium), and it is being used for gold concentration from low-abundance ores. Micrococcus luteus was originally isolated by Alexander Fleming in 1929 as Micrococcus lysodeikticus. This organism can be found in many environments including soil, water, animals, and dairy products. Micrococcus luteus is able to survive in the environment for long periods and has been isolated from inclusions in amber.