Pre_GI: SWBIT SVG BLASTN

Query: NC_013199:2536705 Lactobacillus rhamnosus Lc 705, complete genome

Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

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BLASTN Alignment.txt

Subject: NC_004757:2213806 Nitrosomonas europaea ATCC 19718, complete genome

Lineage: Nitrosomonas europaea; Nitrosomonas; Nitrosomonadaceae; Nitrosomonadales; Proteobacteria; Bacteria

General Information: Ammonia-oxidizing bacterium. This organism is an obligate chemo-lithoautotroph as it only uses ammonia and carbon dioxide and mineral salts for growth, and is an important part of the global biogeochemical nitrogen cycle. It can derive all energy requirements from the oxidation of ammonia to nitrate, driving global nitrogen from the reduced insoluble form to the oxidized and potentially gaseous form (including NO and NO2 which are greenhouse gases). The energy derived from ammonia oxidation is in turn used to drive carbon fixation. This bacterium also provides plants with a readily available form of nitrogen, is important in wastewater treatment, and may be involved in bioremediation of sites contaminated with toxic compounds.