Pre_GI: SWBIT SVG BLASTN

Query: NC_012917:1506083 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.

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BLASTN Alignment.txt

Subject: NC_014721:2534403 Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete

Lineage: Caldicellulosiruptor kristjanssonii; Caldicellulosiruptor; Thermoanaerobacterales Family III; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Country: Iceland; Environment: Hot spring; Isolation: Hot spring biomat; Iceland; Temp: Thermophile. Country:Iceland. Caldicellulosiruptor kristjanssonii is able to degrade cellulose, xylan and other complex substrates. This organism is thermophilic with a growth temperature optimum of 72 degrees C.