Pre_GI: SWBIT SVG BLASTN

Query: NC_012917:1506083 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.

- Sequence; - BLASTN hit (Low score = Light, High score = Dark)
- hypothetical protein; - cds: hover for description

BLASTN Alignment.txt

Subject: NC_010694:1502019 Erwinia tasmaniensis, complete genome

Lineage: Erwinia tasmaniensis; Erwinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Erwinia tasmaniensis Et1/99 (DSM 17950) was isolated from apple flowers in Tasmania, Australia. Erwinia tasmaniensis has been isolated from apple and pear flowers and bark. This organism is not pathogenic to plants and appears to be a common epiphyte, colonizing plant surfaces.