Pre_GI: SWBIT SVG BLASTN

Query: NC_012125:3840000 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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BLASTN Alignment.txt

Subject: NC_015666:1623790 Halopiger xanaduensis SH-6 chromosome, complete genome

Lineage: Halopiger xanaduensis; Halopiger; Halobacteriaceae; Halobacteriales; Euryarchaeota; Archaea

General Information: Country: China; Environment: Soil, Salinewater; Isolation: Sediment of saline Lake Shangmatala in Inner Mongolia; Temp: Mesophile; Temp: 37C. Halopiger xanaduensis was first isolated from a saline lake in China. This organism requires a minimum of 15% NaCl for growth with optimum growth occurring at concentrations of 25%.