Pre_GI: SWBIT SVG BLASTN

Query: NC_012125:1693774 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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BLASTN Alignment.txt

Subject: NC_007520:1627978 Thiomicrospira crunogena XCL-2, complete genome

Lineage: Thiomicrospira crunogena; Thiomicrospira; Piscirickettsiaceae; Thiotrichales; Proteobacteria; Bacteria

General Information: This organism is a colorless sulfur-oxidizing bacterium isolated from a deep-sea hydrothermal vent. Sulfur-oxidizing bacterium. Thiomicrospira crunogena is a chemoautotroph commonly isolated from deep sea and shallow-water hydrothermal vents. This organism uses the oxidation of reduced sulfur compounds (thiosulfate, sulfide and sulfur) to generate the energy necessary to fix carbon and plays an important role in the cycling of sulfur in the marine environment.