Pre_GI: SWBIT SVG BLASTN

Query: NC_011147:3075186 Salmonella enterica subsp. enterica serovar Paratyphi A str

Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

- Sequence; - BLASTN hit (Low score = Light, High score = Dark)
- hypothetical protein; - cds: hover for description

BLASTN Alignment.txt

Subject: NC_015499:119200 Thermodesulfobium narugense DSM 14796 chromosome, complete genome

Lineage: Thermodesulfobium narugense; Thermodesulfobium; Thermodesulfobiaceae; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Environment: Hot spring; Isolation: Narugo hot spring; Japan; Temp: Thermophile; Temp: 50C. This organism is a moderate thermophilic autotroph that was able to grow onH2/CO2 by sulfate respiration. It was isolated from a hot spring in Narugo, Japan.