Pre_GI: SWBIT SVG BLASTN

Query: NC_011035:2027916 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome

Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.

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BLASTN Alignment.txt

Subject: NC_005773:1333863 Pseudomonas syringae pv. phaseolicola 1448A, complete genome

Lineage: Pseudomonas savastanoi; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This is gram-negative bacterium pathogenic in plants. Characterized as causing halo blight on beans (Phaseolus vulgaris). This bacterium is closely related to Pseudomonas syringae pv. glycinea and Pseudomonas syringae pv. savastanoi and produces phaseolotoxin, which is a phytotoxin. Strain 1448A is a natural occurring rifampicin-resistant mutant strain and contains a non-functional homolog of avrPphE.