Pre_GI: SWBIT SVG BLASTN

Query: NC_011026:2450325 Chloroherpeton thalassium ATCC 35110, complete genome

Lineage: Chloroherpeton thalassium; Chloroherpeton; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Chloroherpeton thalassium is a non-filamentous, flexing and gliding green sulfur bacterium isolated from marine sources off the North East coast of the USA in the 1980s. This organism is the most distant member of the green sulfur bacteria and is commonly found in aquatic microbial mats. Chloroherpeton thalassium is distinct from the other green sulfur bacteria in that it grows as a filamentous rod and is capable of gliding motility. Chloroherpeton thalassium is a photolithotroph, obtaining energy by anoxygenic photosynthesis using sulfide or sulfur as the electron donor. The photosynthetic apparatus consist of membrane-bound iron/sulfur reaction center associated with a light absorbing organelle, the chlorosome.

- Sequence; - BLASTN hit (Low score = Light, High score = Dark)
- hypothetical protein; - cds: hover for description

BLASTN Alignment.txt

Subject: NC_008149:1122693 Yersinia pestis Nepal516, complete genome

Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.