Query: NC_009720:583060 Xanthobacter autotrophicus Py2, complete genome Lineage: Xanthobacter autotrophicus; Xanthobacter; Xanthobacteraceae; Rhizobiales; Proteobacteria; Bacteria General Information: Alkene-degrading bacterium. Xanthobacter autotrophicus is a nitrogen-fixing methylotroph, commonly isolated from organic rich soil, sediment and water. This organism uses an alkene-specific monooxygenase to convert propene to epoxypropane. This monooxygenase is also able to catalyze the initial step in the cometabolism of chlorinated alkenes such as vinyl chloride and trichloroethene. The Xanthobacter autotrophicus alkene monooxygenase and other genes involved in alkene degradation are located on a 320 kb megaplasmid.
- Sequence; - BLASTN hit (Low score = Light, High score = Dark) - hypothetical protein; - cds: hover for description
General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.