Pre_GI: SWBIT SVG BLASTN

Query: NC_008513:343540 Buchnera aphidicola str. Cc (Cinara cedri), complete genome

Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is found in the cedar aphid, Cinara cedri. Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.

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BLASTN Alignment.txt

Subject: NC_012814:1757753 Bifidobacterium animalis subsp. lactis Bl-04, complete genome

Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: ATCC SD5219. B. animalis subsp. lactis is a Gram-positive lactic acid bacterium commonly found in the gut of healthy humans, which has the ability to survive in the GIT, adhere to human epithelial cells in vitro, modify fecal flora, modulate the host immune response, utilize non-digestible oligosaccharides, and prevent microbial gastroenteritis and colitis.