Pre_GI: SWBIT SVG BLASTN

Query: NC_008043:167108 Silicibacter sp. TM1040 mega plasmid, complete sequence

Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.

- Sequence; - BLASTN hit (Low score = Light, High score = Dark)
- hypothetical protein; - cds: hover for description

BLASTN Alignment.txt

Subject: NC_009832:4136878 Serratia proteamaculans 568, complete genome

Lineage: Serratia proteamaculans; Serratia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated as a root endophyte from Populus trichocarpa. This species is associated with a serious form of pneumonia in humans, and is the causal agent of amber disease in the grass grub. Interestingly, it also contains an inducible activator which promotes the growth of soybeans under greenhouse conditions.