Pre_GI: SWBIT SVG BLASTN

Query: NC_007613:864084 Shigella boydii Sb227, complete genome

Lineage: Shigella boydii; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic that took place in China in the 1950s. Causes dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella boydii is uncommon except in India, where it was first isolated. Progression to clinical dysentery occurs in most patients infected with this organism.

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BLASTN Alignment.txt

Subject: NC_007498:2087811 Pelobacter carbinolicus DSM 2380, complete genome

Lineage: Pelobacter carbinolicus; Pelobacter; Pelobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: Pelobacter carbinolicus DSM 2380 was isolated from mud in Venice, Italy. Iron- and sulfur-reducing bacterium. Pelobacter carbinolicus is commonly isolated from marine and freshwater sediments, and sewage sludge. This organism can make up a significant portion of the anaerobic microbial community in these environments. Pelobacter carbinolicus is also able to grow using iron and sulfur as terminal electron acceptors. This organism is closely related to the sulfur-reducing Desulfuromonas spp. and iron-reducing Geobacter spp..