Pre_GI: SWBIT SVG BLASTN

Query: NC_004917:946550 Helicobacter hepaticus ATCC 51449, complete genome

Lineage: Helicobacter hepaticus; Helicobacter; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This organism was found to be linked to an increasing incidence of liver tumors in mouse colonies at the National Cancer Institute in 1992. Normally it resides in the lower intestines, but it can cause chronic hepatitis. This organism has a similar urease gene cluster and cytolethal distending toxin as compared to Helicobacter pylori, but lacks other virulence factors such as the vacuolating cytotoxin and the cag pathogenicity island. However, it does contain a pathogenicity island that encodes proteins similar to those found in a type IV secretion system. Causes liver disease. This genus consists of organisms that colonize the mucosal layer of the gastrointestinal tract or are found enterohepatically (in the liver). This species was associated with an increase in liver tumors. It can cause active chronic hepatitis and typhlitis (inflammation of a region at the beginning of the large intestine), hepatocellular tumors, and gastric bowel disease in various mice strains.

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BLASTN Alignment.txt

Subject: NC_002689:78297 Thermoplasma volcanium GSS1, complete genome

Lineage: Thermoplasma volcanium; Thermoplasma; Thermoplasmataceae; Thermoplasmatales; Euryarchaeota; Archaea

General Information: This strain is the type strain for this species, and was isolated from a solfataric (volcanic area that gives off sulfuric gases) field. Thermophilic archaea. This organism is a thermophilic, acidophilic, archaea that was isolated from acidic hydrothermal vents on the shore of Aeolian Island of Vulcano, Italy. Growth of this facultative aerobe occurs at temperatures of 33-67°C with optimal at 60°C and pH of 1.0-4.0 (optimal 2.0).