Pre_GI: SWBIT SVG BLASTN

Query: NC_004603:3080614 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.

- Sequence; - BLASTN hit (Low score = Light, High score = Dark)
- hypothetical protein; - cds: hover for description

BLASTN Alignment.txt

Subject: NC_015633:461143 Vibrio anguillarum 775 chromosome chromosome I, complete sequence

Lineage: Vibrio anguillarum; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Listonella anguillarum, formerly Vibrio anguillarum is an opportunistic pathogen in economically important marine fish such as eel, flounder and salmon. This disease causes lesions on the skin and around the mouth and gills of the fish often progressing to a systemic infection causing death. If left untreated this disease can cause significant losses in commercial hatcheries.