Pre_GI: SWBIT SVG BLASTN

Query: NC_003198:2703013 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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BLASTN Alignment.txt

Subject: NC_014209:81643 Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,

Lineage: Thermoanaerobacter mathranii; Thermoanaerobacter; Thermoanaerobacteraceae; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Isolation: Hot spring; Country: Iceland; Temp: Thermophile; Temp: 70 - 75C; Habitat: Hot spring. A thermophilic bacterial species of straight rods, occurring singly or sometimes in long chains, motile and Gram variable. Isolated from hot spring, canned foods and dairy products.