Pre_GI: OUP Neighbours

Some Help

Query: NC_020389:714178 Methanosarcina mazei Tuc01, complete genome

D: 24.9559

Host Lineage: Methanosarcina mazei; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This organism is a strictly anaerobic, non-motile, methane-producing archaeon. This organism can also aggregate forming large irregular shaped clumps of cells. Occasionally these aggregates can grow to 1000 microns or more in diameter. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Can be found in decaying leaf litter, garden soil, sewage treatment sludge digestors, black mud, feces of herbivores and other urban waste and sewage products.

Number of Neighbours: 70




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_020389:3142924Methanosarcina mazei Tuc01, complete genome83.1311 %Subject ←→ Query22.7991
NC_020389:1083517*Methanosarcina mazei Tuc01, complete genome83.1832 %Subject ←→ Query22.942
NC_020389:2165590*Methanosarcina mazei Tuc01, complete genome82.8646 %Subject ←→ Query23.1852
NC_020389:1346358*Methanosarcina mazei Tuc01, complete genome81.6115 %Subject ←→ Query23.2551
NC_020389:1936000*Methanosarcina mazei Tuc01, complete genome83.2782 %Subject ←→ Query24.2127
NC_003901:1268995Methanosarcina mazei Go1, complete genome82.3407 %Subject ←→ Query24.3221
NC_020389:3106847Methanosarcina mazei Tuc01, complete genome79.7978 %Subject ←→ Query24.3821
NC_003901:1177056*Methanosarcina mazei Go1, complete genome83.6857 %Subject ←→ Query24.4832
NC_012785:20454*Kosmotoga olearia TBF 19.5.1, complete genome76.6942 %Subject ←→ Query26.1293
NC_014002:403180*Methanohalophilus mahii DSM 5219 chromosome, complete genome76.6513 %Subject ←→ Query26.4135
NC_003901:3750000Methanosarcina mazei Go1, complete genome83.0208 %Subject ←→ Query28.0581
NC_007955:1523500*Methanococcoides burtonii DSM 6242, complete genome75.2022 %Subject ←→ Query28.0731
NC_020389:2288541*Methanosarcina mazei Tuc01, complete genome81.5993 %Subject ←→ Query28.2446
NC_003901:2685716*Methanosarcina mazei Go1, complete genome82.6317 %Subject ←→ Query28.3975
NC_003901:3591500Methanosarcina mazei Go1, complete genome82.9044 %Subject ←→ Query29.0451
NC_020389:990000*Methanosarcina mazei Tuc01, complete genome84.6569 %Subject ←→ Query29.1457
NC_003901:2727361Methanosarcina mazei Go1, complete genome82.1538 %Subject ←→ Query29.3128
NC_003552:5402000Methanosarcina acetivorans C2A, complete genome79.8928 %Subject ←→ Query29.4257
NC_018876:2151226Methanolobus psychrophilus R15 chromosome, complete genome75.8119 %Subject ←→ Query29.5841
NC_019977:828427*Methanomethylovorans hollandica DSM 15978, complete genome76.0386 %Subject ←→ Query30.2977
NC_014002:1772060Methanohalophilus mahii DSM 5219 chromosome, complete genome78.22 %Subject ←→ Query30.7654
NC_003552:4054908*Methanosarcina acetivorans C2A, complete genome80.242 %Subject ←→ Query30.8521
NC_018876:2380018*Methanolobus psychrophilus R15 chromosome, complete genome75.1287 %Subject ←→ Query30.8785
NC_003901:3698164Methanosarcina mazei Go1, complete genome77.6134 %Subject ←→ Query30.9202
NC_003901:860242Methanosarcina mazei Go1, complete genome91.0539 %Subject ←→ Query31.1817
NC_003552:4782635Methanosarcina acetivorans C2A, complete genome81.9455 %Subject ←→ Query32.5138
NC_020389:2439067Methanosarcina mazei Tuc01, complete genome81.4553 %Subject ←→ Query32.5517
NC_003901:815389Methanosarcina mazei Go1, complete genome82.8646 %Subject ←→ Query32.7812
NC_003552:4686036Methanosarcina acetivorans C2A, complete genome77.212 %Subject ←→ Query34.0494
NC_003552:1492500*Methanosarcina acetivorans C2A, complete genome80.6434 %Subject ←→ Query34.0752
NC_003552:1008475Methanosarcina acetivorans C2A, complete genome83.0423 %Subject ←→ Query34.1205
NC_003552:1202909Methanosarcina acetivorans C2A, complete genome80.7721 %Subject Query35.8329
NC_003552:3269000Methanosarcina acetivorans C2A, complete genome80.9099 %Subject Query36.9331
NC_003552:3092456Methanosarcina acetivorans C2A, complete genome80.8732 %Subject Query38.0267
NC_018876:1489895Methanolobus psychrophilus R15 chromosome, complete genome76.9884 %Subject Query39.7637