Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_020387:149890 Dehalococcoides mccartyi BTF08, complete genome

D: 37.1004

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface.There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_014220:2265882*Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query35.0742
NC_014220:1269870*Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query35.0815
NC_014220:837926*Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query35.5089
NC_014220:481923Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query35.7399
NC_014220:587826Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query36.2567
NC_014220:2037560*Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query36.4482
NC_014220:1401065Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query36.5364
NC_020387:149890Dehalococcoides mccartyi BTF08, complete genomeSubject ←→ Query37.1004
NC_014220:1732254*Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query37.3942
NC_014220:1162948Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query37.8629
NC_014220:1670000*Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query38.2022
NC_014220:70490Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query39.8096
NC_014220:170021Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeSubject ←→ Query42.9296