Pre_GI: OUP Neighbours

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Query: NC_020244:3681236 Bacillus subtilis XF-1, complete genome

D: 29.9378

Host Lineage: Bacillus subtilis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism was one of the first bacteria studied, and was named Vibrio subtilis in 1835 and renamed Bacillus subtilis in 1872. It is one of the most well characterized bacterial organisms, and is a model system for cell differentiation and development. This soil bacterium can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the decision to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment through the competence system. The sporulation process is complex and involves the coordinated regulation of hundreds of genes in the genome. This initial step results in the coordinated asymmetric cellular division and endospore formation through multiple stages that produces a single spore from the mother cell.

Number of Neighbours: 204




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_020410:3868573*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete85.5147 %Subject Query43.367
NC_019842:3921424*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,85.4075 %Subject ←→ Query29.0066
NC_020410:3801583*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete85.3217 %Subject ←→ Query33.0165
NC_019842:2134803Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,85.1379 %Subject ←→ Query36.8282
NC_020272:84227*Bacillus amyloliquefaciens IT-45, complete genome85.0613 %Subject ←→ Query36.8169
NC_019896:2805098Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete84.9449 %Subject ←→ Query30.0168
NC_020272:20435Bacillus amyloliquefaciens IT-45, complete genome84.9234 %Subject ←→ Query36.4827
NC_017188:3839478*Bacillus amyloliquefaciens TA208 chromosome, complete genome84.4638 %Subject ←→ Query38.7965
NC_017191:3841170*Bacillus amyloliquefaciens XH7 chromosome, complete genome84.421 %Subject ←→ Query39.5317
NC_020244:3358399Bacillus subtilis XF-1, complete genome84.0993 %Subject ←→ Query27.8332
NC_017188:2512357Bacillus amyloliquefaciens TA208 chromosome, complete genome83.8634 %Subject ←→ Query36.8106
NC_017191:3901914*Bacillus amyloliquefaciens XH7 chromosome, complete genome83.8358 %Subject ←→ Query30.9612
NC_017188:3900951*Bacillus amyloliquefaciens TA208 chromosome, complete genome83.7561 %Subject ←→ Query30.2742
NC_017191:2514401*Bacillus amyloliquefaciens XH7 chromosome, complete genome83.7469 %Subject ←→ Query34.7256
NC_019842:3852062*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,83.6979 %Subject ←→ Query32.6161
NC_017191:754453*Bacillus amyloliquefaciens XH7 chromosome, complete genome83.3609 %Subject ←→ Query32.7778
NC_017188:753039*Bacillus amyloliquefaciens TA208 chromosome, complete genome83.3548 %Subject ←→ Query31.5375
NC_017190:794820*Bacillus amyloliquefaciens LL3 chromosome, complete genome83.3548 %Subject ←→ Query35.3956
NC_019842:680000*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,83.223 %Subject ←→ Query33.4894
NC_017190:591139Bacillus amyloliquefaciens LL3 chromosome, complete genome83.1373 %Subject ←→ Query38.1402
NC_006270:1119000Bacillus licheniformis ATCC 14580, complete genome82.7604 %Subject ←→ Query35.8396
NC_017188:177500*Bacillus amyloliquefaciens TA208 chromosome, complete genome82.4571 %Subject ←→ Query32.9037
NC_016023:579000*Bacillus coagulans 36D1 chromosome, complete genome82.4449 %Subject ←→ Query31.7659
NC_017191:183500*Bacillus amyloliquefaciens XH7 chromosome, complete genome82.3958 %Subject ←→ Query33.4022
NC_019842:2575000Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,82.3621 %Subject ←→ Query33.5157
NC_017190:182449*Bacillus amyloliquefaciens LL3 chromosome, complete genome82.307 %Subject ←→ Query37.5182
NC_020410:198000*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete82.068 %Subject ←→ Query34.0295
NC_020410:1123121*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete81.9118 %Subject Query40.5049
UCMB5137:276121*Bacillus atrophaeus UCMB-513781.8781 %Subject ←→ Query27.2586
NC_020272:1384525Bacillus amyloliquefaciens IT-45, complete genome81.7279 %Subject ←→ Query30.5835
NC_016641:1984206Paenibacillus terrae HPL-003 chromosome, complete genome81.4645 %Subject ←→ Query36.382
NC_006270:2172693*Bacillus licheniformis ATCC 14580, complete genome81.345 %Subject ←→ Query36.7478
NC_019842:3755275*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,80.7292 %Subject ←→ Query29.819
NC_020410:1301500Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete80.5607 %Subject Query42.4347
NC_020272:599064*Bacillus amyloliquefaciens IT-45, complete genome80.5208 %Subject ←→ Query27.6842
NC_016641:5729308Paenibacillus terrae HPL-003 chromosome, complete genome80.1746 %Subject ←→ Query36.1077
NC_016641:1369424Paenibacillus terrae HPL-003 chromosome, complete genome80.0858 %Subject ←→ Query33.3658
NC_016048:2907702*Oscillibacter valericigenes Sjm18-20, complete genome80.046 %Subject ←→ Query39.698
NC_014219:2284000Bacillus selenitireducens MLS10 chromosome, complete genome79.6507 %Subject ←→ Query31.7181
NC_016048:4163225Oscillibacter valericigenes Sjm18-20, complete genome79.4148 %Subject ←→ Query39.4452
NC_015634:959396Bacillus coagulans 2-6 chromosome, complete genome79.3842 %Subject ←→ Query35.0988
NC_009441:3597020Flavobacterium johnsoniae UW101 chromosome, complete genome79.1422 %Subject ←→ Query27.1431
NC_006322:1994000Bacillus licheniformis ATCC 14580, complete genome79.0441 %Subject ←→ Query34.2412
NC_018866:63498*Dehalobacter sp. DCA chromosome, complete genome78.9093 %Subject ←→ Query27.717
NC_016023:875416Bacillus coagulans 36D1 chromosome, complete genome78.8787 %Subject ←→ Query28.0678
NC_017188:3764061Bacillus amyloliquefaciens TA208 chromosome, complete genome78.8664 %Subject ←→ Query34.2893
NC_011837:3814000*Clostridium kluyveri NBRC 12016, complete genome78.7684 %Subject Query43.193
NC_009706:3882500*Clostridium kluyveri DSM 555 chromosome, complete genome78.7653 %Subject Query43.1645
NC_014624:1840209*Eubacterium limosum KIST612 chromosome, complete genome78.6795 %Subject ←→ Query39.1048
NC_017195:3815491*Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete78.6795 %Subject ←→ Query27.9498
NC_019842:1919866Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,78.6734 %Subject ←→ Query34.091
NC_016023:1501553Bacillus coagulans 36D1 chromosome, complete genome78.5968 %Subject ←→ Query31.0527
NC_014624:2549219Eubacterium limosum KIST612 chromosome, complete genome78.5018 %Subject ←→ Query33.6363
NC_017191:3766960Bacillus amyloliquefaciens XH7 chromosome, complete genome78.4896 %Subject ←→ Query34.5397
NC_017190:3812065Bacillus amyloliquefaciens LL3 chromosome, complete genome78.4804 %Subject ←→ Query35.0987
NC_011060:2099255Pelodictyon phaeoclathratiforme BU-1, complete genome78.2721 %Subject Query43.0974
NC_015634:2933712Bacillus coagulans 2-6 chromosome, complete genome78.22 %Subject ←→ Query32.363
NC_020410:1856376Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete78.1801 %Subject ←→ Query34.5972
NC_016048:751000*Oscillibacter valericigenes Sjm18-20, complete genome78.1556 %Subject ←→ Query38.2715
NC_020244:1335531Bacillus subtilis XF-1, complete genome78.079 %Subject ←→ Query39.7222
NC_009441:3522519*Flavobacterium johnsoniae UW101 chromosome, complete genome77.9902 %Subject ←→ Query25.0902
NC_018867:2354000Dehalobacter sp. CF chromosome, complete genome77.9841 %Subject ←→ Query27.3164
NC_015164:1158796*Bacteroides salanitronis DSM 18170 chromosome, complete genome77.9473 %Subject ←→ Query36.965
NC_016048:1602500Oscillibacter valericigenes Sjm18-20, complete genome77.7267 %Subject ←→ Query38.8165
NC_015634:652000*Bacillus coagulans 2-6 chromosome, complete genome77.549 %Subject ←→ Query37.5131
NC_014624:287500Eubacterium limosum KIST612 chromosome, complete genome77.5 %Subject ←→ Query34.2473
NC_015172:1002872Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome77.4449 %Subject ←→ Query39.8772
NC_016791:3953972*Clostridium sp. BNL1100 chromosome, complete genome77.3591 %Subject ←→ Query37.1028
NC_007759:2179000*Syntrophus aciditrophicus SB, complete genome77.3468 %Subject ←→ Query38.7732
NC_014364:3500041Spirochaeta smaragdinae DSM 11293 chromosome, complete genome77.3376 %Subject ←→ Query37.6252
NC_014364:815346Spirochaeta smaragdinae DSM 11293 chromosome, complete genome77.3009 %Subject ←→ Query38.5007
NC_009441:4449500*Flavobacterium johnsoniae UW101 chromosome, complete genome77.2518 %Subject ←→ Query33.6096
NC_017068:638868*Selenomonas ruminantium subsp. lactilytica TAM6421, complete77.1599 %Subject Query40.4638
NC_015436:474710*Spirochaeta coccoides DSM 17374 chromosome, complete genome77.1262 %Subject Query40.0979
NC_008639:2968000*Chlorobium phaeobacteroides DSM 266, complete genome77.1017 %Subject ←→ Query38.2214
NC_011830:1190502*Desulfitobacterium hafniense DCB-2, complete genome77.1017 %Subject ←→ Query30.6359
NC_008639:378181Chlorobium phaeobacteroides DSM 266, complete genome76.8444 %Subject ←→ Query36.2623
NC_021184:3533500Desulfotomaculum gibsoniae DSM 7213, complete genome76.8413 %Subject ←→ Query31.6644
NC_018867:121512Dehalobacter sp. CF chromosome, complete genome76.7831 %Subject ←→ Query30.0725
NC_009614:947775Bacteroides vulgatus ATCC 8482 chromosome, complete genome76.7218 %Subject ←→ Query31.1968
NC_011060:330437*Pelodictyon phaeoclathratiforme BU-1, complete genome76.6881 %Subject ←→ Query34.8821
NC_007759:1356439*Syntrophus aciditrophicus SB, complete genome76.489 %Subject ←→ Query37.0877
NC_014624:3316916Eubacterium limosum KIST612 chromosome, complete genome76.4675 %Subject ←→ Query34.8711
NC_016641:3217201*Paenibacillus terrae HPL-003 chromosome, complete genome76.4369 %Subject ←→ Query36.6474
NC_016791:3891272*Clostridium sp. BNL1100 chromosome, complete genome76.348 %Subject ←→ Query28.7476
NC_011035:829945Neisseria gonorrhoeae NCCP11945 chromosome, complete genome76.3388 %Subject ←→ Query35.3078
NC_014622:3525017Paenibacillus polymyxa SC2 chromosome, complete genome76.3051 %Subject ←→ Query37.2902
NC_016048:308342Oscillibacter valericigenes Sjm18-20, complete genome76.0846 %Subject ←→ Query39.312
NC_014364:3707311Spirochaeta smaragdinae DSM 11293 chromosome, complete genome76.0141 %Subject Query41.4323
NC_008639:2358592Chlorobium phaeobacteroides DSM 266, complete genome75.9191 %Subject ←→ Query38.5171
NC_016584:2244966*Desulfosporosinus orientis DSM 765 chromosome, complete genome75.8333 %Subject ←→ Query39.4913
NC_008639:2460033Chlorobium phaeobacteroides DSM 266, complete genome75.7935 %Subject ←→ Query36.2846
NC_014624:2996377*Eubacterium limosum KIST612 chromosome, complete genome75.7782 %Subject ←→ Query35.6544
NC_007759:1028977*Syntrophus aciditrophicus SB, complete genome75.7629 %Subject ←→ Query33.3392
NC_012108:1694817Desulfobacterium autotrophicum HRM2, complete genome75.5668 %Subject ←→ Query31.5108
NC_009483:3727490*Geobacter uraniireducens Rf4 chromosome, complete genome75.5545 %Subject ←→ Query37.2173
NC_019896:2719456Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete75.337 %Subject ←→ Query28.504
NC_017068:2827568Selenomonas ruminantium subsp. lactilytica TAM6421, complete75.2941 %Subject Query40.6432
NC_010803:2474554Chlorobium limicola DSM 245, complete genome75.2022 %Subject Query44.7864
NC_014624:140000Eubacterium limosum KIST612 chromosome, complete genome75.0888 %Subject ←→ Query34.4784
NC_012108:4971086Desulfobacterium autotrophicum HRM2, complete genome75.0797 %Subject ←→ Query31.5092
NC_007759:1169547Syntrophus aciditrophicus SB, complete genome75.0153 %Subject ←→ Query32.6811