Pre_GI: OUP Neighbours

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Query: NC_020134:2948000 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

D: 35.2359

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.

Number of Neighbours: 80

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_020419:977778Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, complete76.9884 %Subject Query19.8231
NC_013517:2815482Sebaldella termitidis ATCC 33386, complete genome76.4216 %Subject Query23.0183
NC_016627:3205333*Clostridium clariflavum DSM 19732 chromosome, complete genome81.6023 %Subject Query24.0005
NC_019970:35985Thermoanaerobacterium thermosaccharolyticum M0795, complete genome75.9896 %Subject Query24.5709
NC_013517:1055854*Sebaldella termitidis ATCC 33386, complete genome75.1899 %Subject Query24.8121
NC_016627:2524307*Clostridium clariflavum DSM 19732 chromosome, complete genome80.4779 %Subject Query24.9698
NC_016627:3815690*Clostridium clariflavum DSM 19732 chromosome, complete genome78.4038 %Subject ←→ Query26.2689
NC_016627:4270949*Clostridium clariflavum DSM 19732 chromosome, complete genome78.462 %Subject ←→ Query26.3945
NC_020134:1243122*Clostridium stercorarium subsp. stercorarium DSM 8532, complete85.6771 %Subject ←→ Query27.2486
NC_009012:1Clostridium thermocellum ATCC 27405, complete genome78.6336 %Subject ←→ Query27.6125
NC_016627:4203775*Clostridium clariflavum DSM 19732 chromosome, complete genome78.3456 %Subject ←→ Query27.9383
NC_020134:2801199*Clostridium stercorarium subsp. stercorarium DSM 8532, complete84.329 %Subject ←→ Query27.9973
NS_000191:120700*Uncultured Termite group 1 bacterium phylotype Rs-D17, complete76.4185 %Subject ←→ Query28.2201
NC_020134:2193900*Clostridium stercorarium subsp. stercorarium DSM 8532, complete86.3113 %Subject ←→ Query28.7889
NC_016791:1266404Clostridium sp. BNL1100 chromosome, complete genome75.095 %Subject ←→ Query29.0248
NC_009012:1663357Clostridium thermocellum ATCC 27405, complete genome81.7494 %Subject ←→ Query29.2515
NC_014376:460687Clostridium saccharolyticum WM1 chromosome, complete genome75.1808 %Subject ←→ Query29.4139
NC_020134:2832857*Clostridium stercorarium subsp. stercorarium DSM 8532, complete85.0858 %Subject ←→ Query29.5505
NC_016791:2983349Clostridium sp. BNL1100 chromosome, complete genome76.2684 %Subject ←→ Query30.1693
NC_013895:188225*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.8149 %Subject ←→ Query30.3016
NC_020134:2295092*Clostridium stercorarium subsp. stercorarium DSM 8532, complete85.8425 %Subject ←→ Query30.3131
NC_014152:305955*Thermincola sp. JR, complete genome77.3621 %Subject ←→ Query30.3988
NC_016627:2593242*Clostridium clariflavum DSM 19732 chromosome, complete genome78.2843 %Subject ←→ Query30.6299
NC_016791:1132451*Clostridium sp. BNL1100 chromosome, complete genome78.0607 %Subject ←→ Query31.4679
NC_014376:1842290*Clostridium saccharolyticum WM1 chromosome, complete genome77.0925 %Subject ←→ Query31.9269
NC_009012:75000*Clostridium thermocellum ATCC 27405, complete genome79.2004 %Subject ←→ Query32.8915
NC_014219:2491021Bacillus selenitireducens MLS10 chromosome, complete genome75.1562 %Subject ←→ Query33.0881
NC_009012:2806000*Clostridium thermocellum ATCC 27405, complete genome80.3186 %Subject ←→ Query33.4083
NC_012781:2148478*Eubacterium rectale ATCC 33656, complete genome76.348 %Subject ←→ Query33.5846
NC_016627:4323370*Clostridium clariflavum DSM 19732 chromosome, complete genome80.8946 %Subject ←→ Query34.4514
NC_014377:1060000Thermosediminibacter oceani DSM 16646 chromosome, complete genome78.5784 %Subject ←→ Query35.3994
NC_014377:1335963*Thermosediminibacter oceani DSM 16646 chromosome, complete genome76.973 %Subject ←→ Query35.5697
NC_016641:2476634Paenibacillus terrae HPL-003 chromosome, complete genome75.0214 %Subject ←→ Query35.9497
NC_012781:751757*Eubacterium rectale ATCC 33656, complete genome75.5331 %Subject ←→ Query36.7643
NC_008023:1070986*Streptococcus pyogenes MGAS2096, complete genome75.7598 %Subject ←→ Query39.0651
NC_016641:5926000*Paenibacillus terrae HPL-003 chromosome, complete genome75.8977 %Subject ←→ Query39.178
NC_015977:189101Roseburia hominis A2-183 chromosome, complete genome75.1409 %Subject ←→ Query40.9219
NC_015977:3011177Roseburia hominis A2-183 chromosome, complete genome76.5533 %Subject ←→ Query44.0829
NC_015977:935798*Roseburia hominis A2-183 chromosome, complete genome75.2819 %Subject ←→ Query44.2207
NC_015977:2807782*Roseburia hominis A2-183 chromosome, complete genome75.8824 %Subject ←→ Query44.7042