Pre_GI: OUP Neighbours

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Query: NC_020134:2801199 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

D: 27.9973

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.

Number of Neighbours: 90




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_020419:977778Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, complete75.6924 %Subject ←→ Query19.8231
NC_016627:3205333*Clostridium clariflavum DSM 19732 chromosome, complete genome80.4718 %Subject ←→ Query24.0005
NC_016627:2524307*Clostridium clariflavum DSM 19732 chromosome, complete genome80.6771 %Subject ←→ Query24.9698
NC_016627:4270949*Clostridium clariflavum DSM 19732 chromosome, complete genome80.3768 %Subject ←→ Query26.3945
NC_020134:2772500Clostridium stercorarium subsp. stercorarium DSM 8532, complete83.6213 %Subject ←→ Query27.3127
NC_009012:1Clostridium thermocellum ATCC 27405, complete genome75.818 %Subject ←→ Query27.6125
NC_016627:4203775*Clostridium clariflavum DSM 19732 chromosome, complete genome79.5129 %Subject ←→ Query27.9383
NS_000191:120700*Uncultured Termite group 1 bacterium phylotype Rs-D17, complete75.3431 %Subject ←→ Query28.2201
NC_020134:2193900*Clostridium stercorarium subsp. stercorarium DSM 8532, complete85.8915 %Subject ←→ Query28.7889
NC_016791:1266404Clostridium sp. BNL1100 chromosome, complete genome75.3738 %Subject ←→ Query29.0248
NC_014376:4048728*Clostridium saccharolyticum WM1 chromosome, complete genome75.576 %Subject ←→ Query29.113
NC_009012:1663357Clostridium thermocellum ATCC 27405, complete genome81.0172 %Subject ←→ Query29.2515
NC_020134:2832857*Clostridium stercorarium subsp. stercorarium DSM 8532, complete86.0631 %Subject ←→ Query29.5505
NC_016791:2983349Clostridium sp. BNL1100 chromosome, complete genome77.9259 %Subject ←→ Query30.1693
NC_013895:188225*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.8732 %Subject ←→ Query30.3016
NC_014152:305955*Thermincola sp. JR, complete genome78.9154 %Subject ←→ Query30.3988
NC_016627:2593242*Clostridium clariflavum DSM 19732 chromosome, complete genome75.7384 %Subject ←→ Query30.6299
NC_015520:595532*Mahella australiensis 50-1 BON chromosome, complete genome75.0031 %Subject ←→ Query31.4658
NC_016791:1132451*Clostridium sp. BNL1100 chromosome, complete genome79.136 %Subject ←→ Query31.4679
NC_014376:1842290*Clostridium saccharolyticum WM1 chromosome, complete genome78.5355 %Subject ←→ Query31.9269
NC_009012:75000*Clostridium thermocellum ATCC 27405, complete genome78.3149 %Subject ←→ Query32.8915
NC_015520:2821406Mahella australiensis 50-1 BON chromosome, complete genome77.8125 %Subject ←→ Query32.9861
NC_014219:2491021Bacillus selenitireducens MLS10 chromosome, complete genome76.5993 %Subject ←→ Query33.0881
NC_015520:2974048Mahella australiensis 50-1 BON chromosome, complete genome76.5472 %Subject ←→ Query33.3024
NC_015520:2567329Mahella australiensis 50-1 BON chromosome, complete genome76.6299 %Subject ←→ Query33.3587
NC_009012:2806000*Clostridium thermocellum ATCC 27405, complete genome77.8585 %Subject ←→ Query33.4083
NC_014483:1973233*Paenibacillus polymyxa E681 chromosome, complete genome75.3339 %Subject ←→ Query33.5725
NC_014624:2878457Eubacterium limosum KIST612 chromosome, complete genome76.394 %Subject ←→ Query33.5816
NC_012781:2148478*Eubacterium rectale ATCC 33656, complete genome75.8425 %Subject ←→ Query33.5846
NC_014624:2569604Eubacterium limosum KIST612 chromosome, complete genome75.5147 %Subject ←→ Query34.0437
NC_015520:3060495Mahella australiensis 50-1 BON chromosome, complete genome76.1458 %Subject ←→ Query34.2391
NC_016627:4323370*Clostridium clariflavum DSM 19732 chromosome, complete genome82.1661 %Subject ←→ Query34.4514
NC_012781:4065*Eubacterium rectale ATCC 33656, complete genome75.144 %Subject ←→ Query34.9939
NC_020134:2948000*Clostridium stercorarium subsp. stercorarium DSM 8532, complete84.329 %Subject ←→ Query35.2359
NC_015737:449914Clostridium sp. SY8519, complete genome75.1624 %Subject ←→ Query35.9497
NC_016641:2476634Paenibacillus terrae HPL-003 chromosome, complete genome76.6115 %Subject ←→ Query35.9497
NC_012781:751757*Eubacterium rectale ATCC 33656, complete genome76.5349 %Subject ←→ Query36.7643
NC_015977:3324000*Roseburia hominis A2-183 chromosome, complete genome77.3101 %Subject ←→ Query37.2295
NC_008023:1070986*Streptococcus pyogenes MGAS2096, complete genome75.4688 %Subject Query39.0651
NC_016641:5926000*Paenibacillus terrae HPL-003 chromosome, complete genome77.3529 %Subject Query39.178
NC_017068:1401352Selenomonas ruminantium subsp. lactilytica TAM6421, complete76.2132 %Subject Query39.7608
NC_015977:189101Roseburia hominis A2-183 chromosome, complete genome77.5031 %Subject Query40.9219
NC_015977:3011177Roseburia hominis A2-183 chromosome, complete genome78.9645 %Subject Query44.0829
NC_015977:935798*Roseburia hominis A2-183 chromosome, complete genome76.5717 %Subject Query44.2207
NC_015977:2807782*Roseburia hominis A2-183 chromosome, complete genome76.5962 %Subject Query44.7042