Pre_GI: OUP Neighbours

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Query: NC_018870:1953748 Thermacetogenium phaeum DSM 12270 chromosome, complete genome

D: 36.7157

Host Lineage: Thermacetogenium phaeum; Thermacetogenium; Thermoanaerobacteraceae; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Nitrogen fixation. Thermophilic strictly anaerobic bacterium oxidizing acetate to CO2 in syntrophic association with a methanogenic partner. Capable of growing with various substrates such as alcohols and methylated nitrogen compounds, and to reduce sulfate in the presence of acetate. Isolated from sludge of an anaerobic digester run at 58 degrees C. Thermacetogenium phaeum is a strictly anaerobic, homoacetogenic bacterium. It is exceptional because it can use the homoacetogenic Wood-Ljungdahl (CO- dehydrogenase) pathway both for acetate formation and acetate oxidation. Acetate oxidation is possible only in syntrophic cooperation with a methanogenic partner which maintains a low hydrogen and/or formate concentration in the coculture. With this, the bacterium operates close to the thermodynamic equilibrium of substrate conversion, similar to other syntrophically fermenting bacteria such as Syntrophomonas wolfei the genomes of which have been sequenced as well in the recent past.

Number of Neighbours: 70

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014216:3003347Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome75.6036 %Subject Query25.4377
NC_012918:2758775*Geobacter sp. M21 chromosome, complete genome75.7874 %Subject ←→ Query28.8333
NC_011979:3880488Geobacter sp. FRC-32, complete genome75.0306 %Subject ←→ Query31.025
NC_011979:4293859*Geobacter sp. FRC-32, complete genome79.0257 %Subject ←→ Query31.8357
NC_011979:3045952*Geobacter sp. FRC-32, complete genome77.6685 %Subject ←→ Query32.1498
NC_011979:1683964Geobacter sp. FRC-32, complete genome77.7819 %Subject ←→ Query32.1528
NC_015172:1120000*Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome75.8977 %Subject ←→ Query32.3504
NC_007498:919697Pelobacter carbinolicus DSM 2380, complete genome75.0092 %Subject ←→ Query32.9516
NC_007759:512477Syntrophus aciditrophicus SB, complete genome75.8548 %Subject ←→ Query33.4195
NC_007759:623116Syntrophus aciditrophicus SB, complete genome75.867 %Subject ←→ Query33.7001
NC_007498:1848437Pelobacter carbinolicus DSM 2380, complete genome75.4841 %Subject ←→ Query33.8157
NC_007759:1666967*Syntrophus aciditrophicus SB, complete genome75.1317 %Subject ←→ Query34.081
NC_011979:3070110Geobacter sp. FRC-32, complete genome77.8064 %Subject ←→ Query34.1528
NC_011979:3712845*Geobacter sp. FRC-32, complete genome79.8744 %Subject ←→ Query34.2534
NC_015732:2880801*Spirochaeta caldaria DSM 7334 chromosome, complete genome76.78 %Subject ←→ Query34.921
NC_007759:1419171Syntrophus aciditrophicus SB, complete genome75.6189 %Subject ←→ Query34.9631
NC_018870:354164Thermacetogenium phaeum DSM 12270 chromosome, complete genome80.4657 %Subject ←→ Query35.3402
NC_011979:537862Geobacter sp. FRC-32, complete genome77.6869 %Subject ←→ Query35.6274
NC_009483:66502Geobacter uraniireducens Rf4 chromosome, complete genome76.1121 %Subject ←→ Query35.9253
NC_011979:646518Geobacter sp. FRC-32, complete genome75.6434 %Subject ←→ Query36.0713
NC_009483:1551040Geobacter uraniireducens Rf4 chromosome, complete genome75.046 %Subject ←→ Query36.4664
NC_010814:294394*Geobacter lovleyi SZ, complete genome75.3585 %Subject ←→ Query36.4877
NC_018870:484000Thermacetogenium phaeum DSM 12270 chromosome, complete genome76.9026 %Subject ←→ Query37.2683
NC_009483:2854500Geobacter uraniireducens Rf4 chromosome, complete genome77.5674 %Subject ←→ Query37.4278
NC_009483:3331500Geobacter uraniireducens Rf4 chromosome, complete genome75.671 %Subject ←→ Query37.8526
NC_009483:5113729*Geobacter uraniireducens Rf4 chromosome, complete genome77.4173 %Subject ←→ Query38.2424
NC_008609:112340*Pelobacter propionicus DSM 2379, complete genome75.3676 %Subject ←→ Query38.4837
NC_013223:1090397Desulfohalobium retbaense DSM 5692, complete genome75.0674 %Subject ←→ Query39.6412
NC_009483:2489000*Geobacter uraniireducens Rf4 chromosome, complete genome76.921 %Subject ←→ Query41.1564
NC_009483:2401209*Geobacter uraniireducens Rf4 chromosome, complete genome77.1967 %Subject ←→ Query43.2402
NC_007759:415456Syntrophus aciditrophicus SB, complete genome75.1593 %Subject ←→ Query44.5461
NC_011979:2641500*Geobacter sp. FRC-32, complete genome77.4877 %Subject Query47.2989
NC_008609:251608Pelobacter propionicus DSM 2379, complete genome78.7102 %Subject Query48.2801
NC_008609:1027838Pelobacter propionicus DSM 2379, complete genome75.0276 %Subject Query49.7644
NC_007517:1468719*Geobacter metallireducens GS-15, complete genome77.2335 %Subject Query54.2759