Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_017429:45965 Chlamydia trachomatis G/9768 chromosome, complete genome

D: 24.7325

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_009257:109528*Francisella tularensis subsp. tularensis WY96-3418 chromosome,Subject ←→ Query14.9532
NC_016632:285408Serratia symbiotica str. 'Cinara cedri' chromosome, completeSubject ←→ Query16.0688
NC_016632:170000*Serratia symbiotica str. 'Cinara cedri' chromosome, completeSubject ←→ Query16.87
NC_019814:320260*Candidatus Kinetoplastibacterium blastocrithidii (ex StrigomonasSubject ←→ Query16.923
NC_016632:398018*Serratia symbiotica str. 'Cinara cedri' chromosome, completeSubject ←→ Query17.0537
NC_016632:1637500*Serratia symbiotica str. 'Cinara cedri' chromosome, completeSubject ←→ Query17.1489
NC_005295:1067421Ehrlichia ruminantium str. Welgevonden, complete genomeSubject ←→ Query17.2388
NC_005295:1146500*Ehrlichia ruminantium str. Welgevonden, complete genomeSubject ←→ Query17.2635
NC_016937:24654*Francisella tularensis subsp. tularensis TI0902 chromosome,Subject ←→ Query17.6106
NC_005295:873500Ehrlichia ruminantium str. Welgevonden, complete genomeSubject ←→ Query17.7557
NC_016933:24654*Francisella tularensis TIGB03 chromosome, complete genomeSubject ←→ Query17.8032
NC_005295:845000*Ehrlichia ruminantium str. Welgevonden, complete genomeSubject ←→ Query18.1149
NC_016632:120500*Serratia symbiotica str. 'Cinara cedri' chromosome, completeSubject ←→ Query19.0073
NC_020299:532000*Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeSubject ←→ Query19.4295
NC_016632:1Serratia symbiotica str. 'Cinara cedri' chromosome, completeSubject ←→ Query19.5829
NC_016632:1138000*Serratia symbiotica str. 'Cinara cedri' chromosome, completeSubject ←→ Query20.2676
NC_017292:716050Chlamydophila psittaci 02DC15 chromosome, complete genomeSubject ←→ Query20.3763
NC_019814:678404*Candidatus Kinetoplastibacterium blastocrithidii (ex StrigomonasSubject ←→ Query21.1667
NC_017290:716092Chlamydophila psittaci 08DC60 chromosome, complete genomeSubject ←→ Query21.2589
NC_005295:998000*Ehrlichia ruminantium str. Welgevonden, complete genomeSubject ←→ Query21.3801
NC_017289:716085Chlamydophila psittaci 01DC11 chromosome, complete genomeSubject ←→ Query21.5649
NC_020248:708024Chlamydophila psittaci Mat116, complete genomeSubject ←→ Query21.6531
NC_017287:710104Chlamydophila psittaci 6BC chromosome, complete genomeSubject ←→ Query21.8446
NC_015470:1096232*Chlamydophila psittaci 6BC chromosome, complete genomeSubject ←→ Query21.9084
NC_013768:29324Listeria monocytogenes 08-5923, complete genomeSubject ←→ Query21.9388
NC_013766:29324Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query21.9388
NC_005295:272708*Ehrlichia ruminantium str. Welgevonden, complete genomeSubject ←→ Query21.9494
NC_017291:829577*Chlamydophila psittaci C19/98 chromosome, complete genomeSubject ←→ Query21.9784
NC_017292:834749*Chlamydophila psittaci 02DC15 chromosome, complete genomeSubject ←→ Query22.2519
NC_017285:671546Chlamydophila pneumoniae LPCoLN chromosome, complete genomeSubject ←→ Query22.2742
NC_017289:834781*Chlamydophila psittaci 01DC11 chromosome, complete genomeSubject ←→ Query22.2915
NC_017285:913000*Chlamydophila pneumoniae LPCoLN chromosome, complete genomeSubject ←→ Query22.3654
NC_012488:2719955Listeria monocytogenes Clip81459, complete genomeSubject ←→ Query22.5499
NC_017430:350668*Chlamydia trachomatis G/11222 chromosome, complete genomeSubject ←→ Query22.7657
NC_017291:713265Chlamydophila psittaci C19/98 chromosome, complete genomeSubject ←→ Query22.8093
NC_020248:268000Chlamydophila psittaci Mat116, complete genomeSubject ←→ Query22.874
NC_017289:269301*Chlamydophila psittaci 01DC11 chromosome, complete genomeSubject ←→ Query22.8995
NC_017291:269297*Chlamydophila psittaci C19/98 chromosome, complete genomeSubject ←→ Query22.9117
NC_017290:269300*Chlamydophila psittaci 08DC60 chromosome, complete genomeSubject ←→ Query22.933
NC_017292:269297*Chlamydophila psittaci 02DC15 chromosome, complete genomeSubject ←→ Query22.9363
NC_012686:356865*Chlamydia trachomatis B/Jali20/OT chromosome, complete genomeSubject ←→ Query22.9481
NC_016620:341699Bacteriovorax marinus SJ, complete genomeSubject ←→ Query23.0191
NC_005955:1259393*Bartonella quintana str. Toulouse, complete genomeSubject ←→ Query23.094
NC_019907:287339*Liberibacter crescens BT-1 chromosome, complete genomeSubject ←→ Query23.1609
NC_020301:1449616*Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeSubject ←→ Query23.2004
NC_017432:355205*Chlamydia trachomatis G/9301 chromosome, complete genomeSubject ←→ Query23.2794
NC_017440:355205*Chlamydia trachomatis G/11074 chromosome, complete genomeSubject ←→ Query23.2794
NC_017430:49052Chlamydia trachomatis G/11222 chromosome, complete genomeSubject ←→ Query23.3341
NC_017439:45953Chlamydia trachomatis E/150 chromosome, complete genomeSubject ←→ Query23.3524
NC_017289:1096765*Chlamydophila psittaci 01DC11 chromosome, complete genomeSubject ←→ Query23.3585
NC_005956:1139342*Bartonella henselae str. Houston-1, complete genomeSubject ←→ Query23.553
NC_017290:1096599*Chlamydophila psittaci 08DC60 chromosome, complete genomeSubject ←→ Query23.5768
NC_010287:957862*Chlamydia trachomatis 434/Bu, complete genomeSubject ←→ Query23.6199
NC_013768:171889Listeria monocytogenes 08-5923, complete genomeSubject ←→ Query23.6989
NC_013766:171889Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query23.6989
NC_012687:641808*Chlamydia trachomatis B/TZ1A828/OT chromosome, complete genomeSubject ←→ Query23.6989
NC_017439:451535*Chlamydia trachomatis E/150 chromosome, complete genomeSubject ←→ Query23.7111
NC_019907:920797*Liberibacter crescens BT-1 chromosome, complete genomeSubject ←→ Query23.7676
NC_017431:451551*Chlamydia trachomatis E/11023 chromosome, complete genomeSubject ←→ Query23.9178
NC_017287:269205*Chlamydophila psittaci 6BC chromosome, complete genomeSubject ←→ Query24.068
NC_017437:641843*Chlamydia trachomatis A2497 chromosome, complete genomeSubject ←→ Query24.0698
NC_016798:641842*Chlamydia trachomatis A2497, complete genomeSubject ←→ Query24.0698
NC_017437:360949*Chlamydia trachomatis A2497 chromosome, complete genomeSubject ←→ Query24.0844
NC_017436:639268*Chlamydia trachomatis D-LC chromosome, complete genomeSubject ←→ Query24.1184
NC_017292:1096730*Chlamydophila psittaci 02DC15 chromosome, complete genomeSubject ←→ Query24.147
NC_016798:360945*Chlamydia trachomatis A2497, complete genomeSubject ←→ Query24.159
NC_012687:586657*Chlamydia trachomatis B/TZ1A828/OT chromosome, complete genomeSubject ←→ Query24.1656
NC_010280:957890*Chlamydia trachomatis L2b/UCH-1/proctitis, complete genomeSubject ←→ Query24.1792
NC_000117:639268*Chlamydia trachomatis D/UW-3/CX, complete genomeSubject ←→ Query24.2461
NC_019907:467377*Liberibacter crescens BT-1 chromosome, complete genomeSubject ←→ Query24.2863
NC_012686:586714*Chlamydia trachomatis B/Jali20/OT chromosome, complete genomeSubject ←→ Query24.2972
NC_012686:641870*Chlamydia trachomatis B/Jali20/OT chromosome, complete genomeSubject ←→ Query24.3069
NC_016798:586689*Chlamydia trachomatis A2497, complete genomeSubject ←→ Query24.389
NC_017440:583392*Chlamydia trachomatis G/11074 chromosome, complete genomeSubject ←→ Query24.39
NC_017437:586692*Chlamydia trachomatis A2497 chromosome, complete genomeSubject ←→ Query24.4163
NC_005956:1521736Bartonella henselae str. Houston-1, complete genomeSubject ←→ Query24.4934
NC_007429:585774*Chlamydia trachomatis A/HAR-13, complete genomeSubject ←→ Query24.5136
NC_013949:1163456*Helicobacter mustelae 12198 chromosome, complete genomeSubject ←→ Query24.5354
NC_017291:1093946*Chlamydophila psittaci C19/98 chromosome, complete genomeSubject ←→ Query24.62
NC_017429:45965Chlamydia trachomatis G/9768 chromosome, complete genomeSubject ←→ Query24.7325
NC_017440:45965Chlamydia trachomatis G/11074 chromosome, complete genomeSubject ←→ Query24.7325
NC_017432:45965Chlamydia trachomatis G/9301 chromosome, complete genomeSubject ←→ Query24.7325
NC_020301:1132927Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeSubject ←→ Query24.7957
NC_017432:583328*Chlamydia trachomatis G/9301 chromosome, complete genomeSubject ←→ Query24.7963
NC_017287:1096144*Chlamydophila psittaci 6BC chromosome, complete genomeSubject ←→ Query24.8231
NC_017429:583327*Chlamydia trachomatis G/9768 chromosome, complete genomeSubject ←→ Query24.845
NC_017429:362482Chlamydia trachomatis G/9768 chromosome, complete genomeSubject ←→ Query24.9696
NC_012686:49643Chlamydia trachomatis B/Jali20/OT chromosome, complete genomeSubject ←→ Query25.0821
NC_017431:583529*Chlamydia trachomatis E/11023 chromosome, complete genomeSubject ←→ Query25.1179
NC_017429:639530*Chlamydia trachomatis G/9768 chromosome, complete genomeSubject ←→ Query25.1398
NC_017432:639531*Chlamydia trachomatis G/9301 chromosome, complete genomeSubject ←→ Query25.1398
NC_017437:49643Chlamydia trachomatis A2497 chromosome, complete genomeSubject ←→ Query25.1459
NC_016798:49643Chlamydia trachomatis A2497, complete genomeSubject ←→ Query25.1459
NC_012687:49640Chlamydia trachomatis B/TZ1A828/OT chromosome, complete genomeSubject ←→ Query25.1459
NC_017439:639694*Chlamydia trachomatis E/150 chromosome, complete genomeSubject ←→ Query25.1459
NC_013512:126915*Sulfurospirillum deleyianum DSM 6946, complete genomeSubject ←→ Query25.149
NC_017439:583513*Chlamydia trachomatis E/150 chromosome, complete genomeSubject ←→ Query25.2614
NC_017431:639710*Chlamydia trachomatis E/11023 chromosome, complete genomeSubject ←→ Query25.456
NC_020301:669000*Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeSubject ←→ Query25.5862
NC_017440:639595*Chlamydia trachomatis G/11074 chromosome, complete genomeSubject ←→ Query25.5958
NC_020301:1342924*Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeSubject ←→ Query25.5958
NC_007429:49647Chlamydia trachomatis A/HAR-13, complete genomeSubject ←→ Query25.608
NC_011660:2839201Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query25.6131
NC_017430:582000*Chlamydia trachomatis G/11222 chromosome, complete genomeSubject ←→ Query25.8512
NC_008783:145305Bartonella bacilliformis KC583, complete genomeSubject ←→ Query26.0032
NC_015713:1927297Simkania negevensis Z chromosome gsn.131, complete genomeSubject ←→ Query26.006
NC_020248:1087940*Chlamydophila psittaci Mat116, complete genomeSubject ←→ Query26.0899
NC_015408:561987Chlamydophila pecorum E58 chromosome, complete genomeSubject ←→ Query26.3011
NC_017436:581986*Chlamydia trachomatis D-LC chromosome, complete genomeSubject ←→ Query26.5503
NC_017434:581988*Chlamydia trachomatis D-EC chromosome, complete genomeSubject ←→ Query26.5503
NC_005955:1284500*Bartonella quintana str. Toulouse, complete genomeSubject ←→ Query27.0975
NC_015744:900000*Chlamydia trachomatis L2c chromosome, complete genomeSubject ←→ Query27.6386
NC_010161:1811000*Bartonella tribocorum CIP 105476, complete genomeSubject ←→ Query27.9374
NC_012846:2004711*Bartonella grahamii as4aup, complete genomeSubject ←→ Query27.95
NC_020300:131782*Bartonella australis Aust/NH1, complete genomeSubject ←→ Query28.0004
NC_020300:675551*Bartonella australis Aust/NH1, complete genomeSubject ←→ Query28.5931
NC_020300:1041523Bartonella australis Aust/NH1, complete genomeSubject ←→ Query28.9831
NC_013721:1581370*Gardnerella vaginalis 409-05, complete genomeSubject ←→ Query29.3242
NC_015276:2804874*Marinomonas mediterranea MMB-1 chromosome, complete genomeSubject ←→ Query29.8547
NC_010161:1598000*Bartonella tribocorum CIP 105476, complete genomeSubject ←→ Query30.262
NC_013009:225722*Neorickettsia risticii str. Illinois, complete genomeSubject ←→ Query30.3647
NC_014644:1532500*Gardnerella vaginalis ATCC 14019 chromosome, complete genomeSubject ←→ Query30.4718
NC_008783:177161*Bartonella bacilliformis KC583, complete genomeSubject ←→ Query30.6709
NC_007797:1016456*Anaplasma phagocytophilum HZ, complete genomeSubject ←→ Query31.0402
NC_007797:914500*Anaplasma phagocytophilum HZ, complete genomeSubject ←→ Query31.0992
NC_010161:1949637Bartonella tribocorum CIP 105476, complete genomeSubject ←→ Query31.1808
NC_005956:1648000*Bartonella henselae str. Houston-1, complete genomeSubject ←→ Query31.2454
NC_010161:1324381Bartonella tribocorum CIP 105476, complete genomeSubject ←→ Query31.3762
NC_010161:2548254Bartonella tribocorum CIP 105476, complete genomeSubject ←→ Query31.3939
NC_007355:2838952*Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceSubject ←→ Query31.5471
NC_007912:1231436*Saccharophagus degradans 2-40, complete genomeSubject ←→ Query31.6452
NC_020300:583874Bartonella australis Aust/NH1, complete genomeSubject ←→ Query31.9755
NC_020301:1486695*Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeSubject ←→ Query32.2428
NC_006138:1245944*Desulfotalea psychrophila LSv54, complete genomeSubject ←→ Query32.3163
NC_020301:853267Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeSubject ←→ Query32.3626
NC_010161:2155500*Bartonella tribocorum CIP 105476, complete genomeSubject ←→ Query32.5841
NC_016945:370471Vibrio cholerae IEC224 chromosome II, complete sequenceSubject ←→ Query32.6011
NC_015276:2171355*Marinomonas mediterranea MMB-1 chromosome, complete genomeSubject ←→ Query32.7927
NC_014965:1428902*Vibrio vulnificus MO6-24/O chromosome I, complete sequenceSubject ←→ Query32.8611
NC_005363:2588852Bdellovibrio bacteriovorus HD100, complete genomeSubject ←→ Query33.1286
NC_016446:49618Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeSubject ←→ Query33.5614
NC_018697:2055725*Cycloclasticus sp. P1 chromosome, complete genomeSubject ←→ Query33.7578
NC_012580:353273Vibrio cholerae M66-2 chromosome II, complete sequenceSubject ←→ Query34.0437
NC_012997:4906423Teredinibacter turnerae T7901, complete genomeSubject Query34.8325
NC_016945:324519Vibrio cholerae IEC224 chromosome II, complete sequenceSubject Query35.1588
NC_020300:1241968*Bartonella australis Aust/NH1, complete genomeSubject Query35.4329
NC_013203:202008Atopobium parvulum DSM 20469, complete genomeSubject Query36.408
NC_020300:1344453*Bartonella australis Aust/NH1, complete genomeSubject Query39.2578