Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_017343:16000 Staphylococcus aureus subsp. aureus ECT-R 2, complete genome

D: 18.9317

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_017341:1482882Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Subject ←→ Query18.0843
NC_009641:2357468*Staphylococcus aureus subsp. aureus str. Newman chromosome,Subject ←→ Query18.4004
NC_017341:2384736*Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Subject ←→ Query18.7591
NC_017347:2350802*Staphylococcus aureus subsp. aureus T0131 chromosome, completeSubject ←→ Query18.8716
NC_020164:2329340Staphylococcus warneri SG1, complete genomeSubject ←→ Query18.8848
NC_017343:16000*Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeSubject ←→ Query18.9317
NC_017342:1012555*Staphylococcus aureus subsp. aureus TCH60 chromosome, completeSubject ←→ Query19.2202
NC_017337:2319847*Staphylococcus aureus subsp. aureus ED133 chromosome, completeSubject ←→ Query19.3185
NC_017025:1278374Flavobacterium indicum GPTSA100-9, complete genomeSubject ←→ Query19.4911
NC_017338:1419500Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeSubject ←→ Query19.6376
NC_016928:16869*Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query19.6489
NC_009641:15421*Staphylococcus aureus subsp. aureus str. Newman chromosome,Subject ←→ Query19.8502
NC_017353:825856*Staphylococcus lugdunensis N920143, complete genomeSubject ←→ Query19.8856
NC_016928:561138*Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query19.8974
NC_009632:2391397*Staphylococcus aureus subsp. aureus JH1 chromosome, completeSubject ←→ Query19.9082
NC_017343:566000Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeSubject ←→ Query19.9274
NC_013450:1446952Staphylococcus aureus subsp. aureus ED98, complete genomeSubject ←→ Query19.9805
NC_017347:586629*Staphylococcus aureus subsp. aureus T0131 chromosome, completeSubject ←→ Query20.0314
NC_002973:1846000*Listeria monocytogenes str. 4b F2365, complete genomeSubject ←→ Query20.0663
NC_017338:14886*Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeSubject ←→ Query20.087
NC_009487:2390713*Staphylococcus aureus subsp. aureus JH9 chromosome, completeSubject ←→ Query20.0936
NC_017351:1464209*Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeSubject ←→ Query20.2004
NC_017337:1478448Staphylococcus aureus subsp. aureus ED133 chromosome, completeSubject ←→ Query20.2389
NC_017341:591952*Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Subject ←→ Query20.3509
NC_017338:588983Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeSubject ←→ Query20.3935
NC_017347:1483163Staphylococcus aureus subsp. aureus T0131 chromosome, completeSubject ←→ Query20.395
NC_016912:1374351Staphylococcus aureus subsp. aureus VC40 chromosome, completeSubject ←→ Query20.659
NC_016941:2234937*Staphylococcus aureus subsp. aureus MSHR1132, complete genomeSubject ←→ Query20.6638
NC_009487:1557248Staphylococcus aureus subsp. aureus JH9 chromosome, completeSubject ←→ Query20.6773
NC_016928:2249907*Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query20.8607
NC_018704:2149229*Amphibacillus xylanus NBRC 15112, complete genomeSubject ←→ Query21.0816
NC_016941:1411500Staphylococcus aureus subsp. aureus MSHR1132, complete genomeSubject ←→ Query21.0907
NC_017343:2212780*Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeSubject ←→ Query21.0968
NC_016928:1440319Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query21.1409
NC_009632:1557122Staphylococcus aureus subsp. aureus JH1 chromosome, completeSubject ←→ Query21.1614
NC_016912:2170615*Staphylococcus aureus subsp. aureus VC40 chromosome, completeSubject ←→ Query21.2001
NC_009632:640973Staphylococcus aureus subsp. aureus JH1 chromosome, completeSubject ←→ Query21.6243
NC_013766:757987Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query21.6318
NC_015759:536929*Weissella koreensis KACC 15510 chromosome, complete genomeSubject ←→ Query21.6744
NC_016052:842762Tetragenococcus halophilus NBRC 12172, complete genomeSubject ←→ Query21.9417
NC_013766:1202713Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query21.9875
NC_013766:906550Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query22.0057
NC_017343:1391124Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeSubject ←→ Query22.0132
NC_011660:2924397Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query22.0817
NC_003210:721824Listeria monocytogenes EGD-e, complete genomeSubject ←→ Query22.1346
NC_013768:1983711Listeria monocytogenes 08-5923, complete genomeSubject ←→ Query22.2499
NC_009641:1470500Staphylococcus aureus subsp. aureus str. Newman chromosome,Subject ←→ Query22.2601
NC_012488:453431Listeria monocytogenes Clip81459, complete genomeSubject ←→ Query22.4617
NC_011660:724711*Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query22.6167
NC_002973:730942Listeria monocytogenes str. 4b F2365, complete genomeSubject ←→ Query22.6302
NC_017316:2466244*Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query22.7274
NC_020164:701151*Staphylococcus warneri SG1, complete genomeSubject ←→ Query22.7599
NC_010519:445936Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query23.2855
NC_013766:679906Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query23.3402
NC_004668:191732*Enterococcus faecalis V583, complete genomeSubject ←→ Query23.4497
NC_011660:1889504Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query23.6169
NC_012488:1159463Listeria monocytogenes Clip81459, complete genomeSubject ←→ Query23.6635
NC_013768:721897Listeria monocytogenes 08-5923, complete genomeSubject ←→ Query23.7536
NC_017316:2710021*Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query23.7547
NC_010519:1802294*Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query24.1488
NC_013893:359842Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeSubject ←→ Query24.2742
NC_017353:505935Staphylococcus lugdunensis N920143, complete genomeSubject ←→ Query24.6924
NC_011660:2756860Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query24.8401
NC_017316:2637707Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query24.8589
NC_010519:796229Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query25.037
NC_012121:2218500Staphylococcus carnosus subsp. carnosus TM300, complete genomeSubject ←→ Query25.2447
NC_010519:2033980*Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query25.683
NC_016928:589223*Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query25.7285
NC_015603:1Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequenceSubject ←→ Query26.2642
NC_017342:1848031Staphylococcus aureus subsp. aureus TCH60 chromosome, completeSubject ←→ Query26.3068
NC_010519:71365Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query26.3581
NC_020164:1356798Staphylococcus warneri SG1, complete genomeSubject ←→ Query26.4369
NC_010519:1165418Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query26.5151
NC_015277:4269399Sphingobacterium sp. 21 chromosome, complete genomeSubject ←→ Query26.7631
NC_011660:366000Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query26.8414
NC_010519:416658*Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query27.2413
NC_012793:3035978Geobacillus sp. WCH70, complete genomeSubject ←→ Query27.2556
NC_012488:732233Listeria monocytogenes Clip81459, complete genomeSubject ←→ Query27.4501
NC_017316:2581781*Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query27.6154
NC_013766:417991Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query28.129
NC_013768:418000Listeria monocytogenes 08-5923, complete genomeSubject ←→ Query28.129
NC_004668:3118500Enterococcus faecalis V583, complete genomeSubject ←→ Query28.4525
NC_007793:1451409Staphylococcus aureus subsp. aureus USA300, complete genomeSubject ←→ Query28.476
NC_009641:1979053Staphylococcus aureus subsp. aureus str. Newman chromosome,Subject ←→ Query28.638
NC_016052:1818659Tetragenococcus halophilus NBRC 12172, complete genomeSubject ←→ Query28.6557
NC_017138:980696*Bacillus megaterium WSH-002 chromosome, complete genomeSubject ←→ Query28.7972
NC_002758:1508996Staphylococcus aureus subsp. aureus Mu50, complete genomeSubject ←→ Query28.8616
NC_002951:1474465Staphylococcus aureus subsp. aureus COL, complete genomeSubject Query29.1376
NC_017341:1976000Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Subject Query29.1442
NC_002952:1497785Staphylococcus aureus subsp. aureus MRSA252, complete genomeSubject Query29.2682
NC_002745:1432585Staphylococcus aureus subsp. aureus N315, complete genomeSubject Query29.4273
NC_009782:1510396Staphylococcus aureus subsp. aureus Mu3, complete genomeSubject Query29.4968
NC_014554:3164599Lactobacillus plantarum subsp. plantarum ST-III chromosome,Subject Query29.8294
NC_008525:108687*Pediococcus pentosaceus ATCC 25745, complete genomeSubject Query30.0765
NC_014922:825396*Haemophilus influenzae F3047 chromosome, complete genomeSubject Query30.1445
NC_017338:2296906*Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeSubject Query30.1945
NC_017351:2335753*Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeSubject Query30.9639
NC_013450:2306431*Staphylococcus aureus subsp. aureus ED98, complete genomeSubject Query30.9743
NC_020995:1205524Enterococcus casseliflavus EC20, complete genomeSubject Query31.1041
NC_017316:1840462*Enterococcus faecalis OG1RF chromosome, complete genomeSubject Query31.1734
NC_004603:1464000Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeSubject Query31.3716
NC_011660:2175537Listeria monocytogenes HCC23 chromosome, complete genomeSubject Query31.4081
NC_016809:1778000Haemophilus influenzae 10810, complete genomeSubject Query31.4851
NC_015559:1960129Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeSubject Query31.5844
NC_014734:849941*Paludibacter propionicigenes WB4 chromosome, complete genomeSubject Query32.206
NC_013520:91961*Veillonella parvula DSM 2008, complete genomeSubject Query32.6686
NC_009567:904922*Haemophilus influenzae PittGG chromosome, complete genomeSubject Query33.0055
NC_015460:1687684*Gallibacterium anatis UMN179 chromosome, complete genomeSubject Query33.257
NC_010519:1411347Haemophilus somnus 2336 chromosome, complete genomeSubject Query34.6329
NC_016808:1335087Pasteurella multocida 36950 chromosome, complete genomeSubject Query35.9035
NC_015277:2568781Sphingobacterium sp. 21 chromosome, complete genomeSubject Query41.0445