Pre_GI: OUP Neighbours

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Query: NC_017316:2466244 Enterococcus faecalis OG1RF chromosome, complete genome

D: 22.7274

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.

Number of Neighbours: 66




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_017343:16000*Staphylococcus aureus subsp. aureus ECT-R 2, complete genome76.0539 %Subject ←→ Query18.9317
NC_017342:1012555*Staphylococcus aureus subsp. aureus TCH60 chromosome, complete75.8915 %Subject ←→ Query19.2202
NC_017025:1278374Flavobacterium indicum GPTSA100-9, complete genome76.3848 %Subject ←→ Query19.4911
NC_017338:1419500Staphylococcus aureus subsp. aureus JKD6159 chromosome, complete75.1287 %Subject ←→ Query19.6376
NC_016928:16869*Staphylococcus aureus subsp. aureus M013 chromosome, complete76.6851 %Subject ←→ Query19.6489
NC_009641:15421*Staphylococcus aureus subsp. aureus str. Newman chromosome,75.6556 %Subject ←→ Query19.8502
NC_017353:825856*Staphylococcus lugdunensis N920143, complete genome76.1949 %Subject ←→ Query19.8856
NC_009632:2391397*Staphylococcus aureus subsp. aureus JH1 chromosome, complete76.1887 %Subject ←→ Query19.9082
NC_013450:1446952Staphylococcus aureus subsp. aureus ED98, complete genome75.0276 %Subject ←→ Query19.9805
NC_002973:1846000*Listeria monocytogenes str. 4b F2365, complete genome75.4289 %Subject ←→ Query20.0663
NC_017338:14886*Staphylococcus aureus subsp. aureus JKD6159 chromosome, complete76.489 %Subject ←→ Query20.087
NC_009487:2390713*Staphylococcus aureus subsp. aureus JH9 chromosome, complete76.4093 %Subject ←→ Query20.0936
NC_016912:1374351Staphylococcus aureus subsp. aureus VC40 chromosome, complete75.2237 %Subject ←→ Query20.659
NC_016941:2234937*Staphylococcus aureus subsp. aureus MSHR1132, complete genome76.2684 %Subject ←→ Query20.6638
NC_016928:2249907*Staphylococcus aureus subsp. aureus M013 chromosome, complete76.1703 %Subject ←→ Query20.8607
NC_018704:2149229*Amphibacillus xylanus NBRC 15112, complete genome75.2665 %Subject ←→ Query21.0816
NC_016941:1411500Staphylococcus aureus subsp. aureus MSHR1132, complete genome77.1507 %Subject ←→ Query21.0907
NC_013766:757987Listeria monocytogenes 08-5578 chromosome, complete genome78.5784 %Subject ←→ Query21.6318
NC_016052:842762Tetragenococcus halophilus NBRC 12172, complete genome81.6544 %Subject ←→ Query21.9417
NC_013766:1202713Listeria monocytogenes 08-5578 chromosome, complete genome78.3793 %Subject ←→ Query21.9875
NC_013766:906550Listeria monocytogenes 08-5578 chromosome, complete genome81.6146 %Subject ←→ Query22.0057
NC_011660:2924397Listeria monocytogenes HCC23 chromosome, complete genome78.2506 %Subject ←→ Query22.0817
NC_003210:721824Listeria monocytogenes EGD-e, complete genome79.4914 %Subject ←→ Query22.1346
NC_013768:1983711Listeria monocytogenes 08-5923, complete genome78.1924 %Subject ←→ Query22.2499
NC_012488:453431Listeria monocytogenes Clip81459, complete genome79.5374 %Subject ←→ Query22.4617
NC_011660:724711*Listeria monocytogenes HCC23 chromosome, complete genome76.4461 %Subject ←→ Query22.6167
NC_002973:730942Listeria monocytogenes str. 4b F2365, complete genome79.8223 %Subject ←→ Query22.6302
NC_020164:701151*Staphylococcus warneri SG1, complete genome75.1348 %Subject ←→ Query22.7599
NC_010519:445936Haemophilus somnus 2336 chromosome, complete genome76.1918 %Subject ←→ Query23.2855
NC_013766:679906Listeria monocytogenes 08-5578 chromosome, complete genome79.1299 %Subject ←→ Query23.3402
NC_011660:1889504Listeria monocytogenes HCC23 chromosome, complete genome77.2672 %Subject ←→ Query23.6169
NC_012488:1159463Listeria monocytogenes Clip81459, complete genome78.4222 %Subject ←→ Query23.6635
NC_013768:721897Listeria monocytogenes 08-5923, complete genome78.9583 %Subject ←→ Query23.7536
NC_017316:2710021*Enterococcus faecalis OG1RF chromosome, complete genome84.6048 %Subject ←→ Query23.7547
NC_010519:1802294*Haemophilus somnus 2336 chromosome, complete genome76.345 %Subject ←→ Query24.1488
NC_013893:359842Staphylococcus lugdunensis HKU09-01 chromosome, complete genome75.4504 %Subject ←→ Query24.2742
NC_017353:505935Staphylococcus lugdunensis N920143, complete genome77.4418 %Subject ←→ Query24.6924
NC_011660:2756860Listeria monocytogenes HCC23 chromosome, complete genome76.6146 %Subject ←→ Query24.8401
NC_017316:2637707Enterococcus faecalis OG1RF chromosome, complete genome85.4596 %Subject ←→ Query24.8589
NC_010519:796229Haemophilus somnus 2336 chromosome, complete genome78.4436 %Subject ←→ Query25.037
NC_015603:1Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequence78.3793 %Subject ←→ Query26.2642
NC_010519:71365Haemophilus somnus 2336 chromosome, complete genome78.5723 %Subject ←→ Query26.3581
NC_010519:1165418Haemophilus somnus 2336 chromosome, complete genome77.0374 %Subject ←→ Query26.5151
NC_011660:366000Listeria monocytogenes HCC23 chromosome, complete genome81.2224 %Subject ←→ Query26.8414
NC_010519:416658*Haemophilus somnus 2336 chromosome, complete genome78.3272 %Subject ←→ Query27.2413
NC_012488:732233Listeria monocytogenes Clip81459, complete genome78.9828 %Subject ←→ Query27.4501
NC_017316:2581781*Enterococcus faecalis OG1RF chromosome, complete genome85.3094 %Subject ←→ Query27.6154
NC_013766:417991Listeria monocytogenes 08-5578 chromosome, complete genome79.9632 %Subject ←→ Query28.129
NC_013768:418000Listeria monocytogenes 08-5923, complete genome80.0123 %Subject ←→ Query28.129
NC_004668:3118500Enterococcus faecalis V583, complete genome84.4884 %Subject ←→ Query28.4525
NC_009641:1979053Staphylococcus aureus subsp. aureus str. Newman chromosome,77.8768 %Subject ←→ Query28.638
NC_016052:1818659Tetragenococcus halophilus NBRC 12172, complete genome80.53 %Subject ←→ Query28.6557
NC_017341:1976000Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,77.6348 %Subject ←→ Query29.1442
NC_002952:1497785Staphylococcus aureus subsp. aureus MRSA252, complete genome75.4412 %Subject ←→ Query29.2682
NC_014554:3164599Lactobacillus plantarum subsp. plantarum ST-III chromosome,77.9596 %Subject ←→ Query29.8294
NC_008525:108687*Pediococcus pentosaceus ATCC 25745, complete genome77.8493 %Subject ←→ Query30.0765
NC_017338:2296906*Staphylococcus aureus subsp. aureus JKD6159 chromosome, complete76.1703 %Subject ←→ Query30.1945
NC_020995:1205524Enterococcus casseliflavus EC20, complete genome81.5686 %Subject ←→ Query31.1041
NC_017316:1840462*Enterococcus faecalis OG1RF chromosome, complete genome84.4945 %Subject ←→ Query31.1734
NC_004603:1464000Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete77.4969 %Subject ←→ Query31.3716
NC_011660:2175537Listeria monocytogenes HCC23 chromosome, complete genome80.7812 %Subject ←→ Query31.4081
NC_016809:1778000Haemophilus influenzae 10810, complete genome76.0172 %Subject ←→ Query31.4851
NC_009567:904922*Haemophilus influenzae PittGG chromosome, complete genome75.3339 %Subject Query33.0055
NC_015460:1687684*Gallibacterium anatis UMN179 chromosome, complete genome75.7996 %Subject Query33.257
NC_010519:1411347Haemophilus somnus 2336 chromosome, complete genome76.4798 %Subject Query34.6329
NC_016808:1335087Pasteurella multocida 36950 chromosome, complete genome79.2096 %Subject Query35.9035