Pre_GI: OUP Neighbours

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Query: NC_017268:775000 Treponema pallidum subsp. pallidum str. Chicago chromosome,

D: 35.5446

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This organisms is divided into subspecies each of which causes a specific disease. pallidum causes the venereal disease syphilis. pertenue, carateum and endemicum cause the skin infections yaws, pinta and bejel, respectively. Cells are motile, slender, helically shaped flexible organisms, 0.1-0.18 microns in diameter and 6-20 microns long.

Number of Neighbours: 82




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015714:1*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome78.2904 %Subject ←→ Query32.2258
NC_015714:238891*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome80.3186 %Subject ←→ Query33.229
NC_016842:1*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete80.2727 %Subject ←→ Query33.6701
NC_010741:949732*Treponema pallidum subsp. pallidum SS14, complete genome81.0325 %Subject ←→ Query33.6941
NC_016842:748419*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete79.421 %Subject ←→ Query33.7123
NC_016843:1*Treponema pallidum subsp. pertenue str. Gauthier chromosome,80.2911 %Subject ←→ Query33.7521
NC_000919:107373*Treponema pallidum subsp. pallidum str. Nichols, complete genome81.2684 %Subject ←→ Query33.8461
NC_010741:107370*Treponema pallidum subsp. pallidum SS14, complete genome81.2684 %Subject ←→ Query33.9494
NC_017268:1*Treponema pallidum subsp. pallidum str. Chicago chromosome,80.2665 %Subject ←→ Query34.0577
NC_021508:107384*Treponema pallidum subsp. pallidum SS14, complete genome81.2806 %Subject ←→ Query34.2656
NC_015714:943178*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome77.7727 %Subject ←→ Query34.2929
NC_010741:775000*Treponema pallidum subsp. pallidum SS14, complete genome97.2335 %Subject ←→ Query34.3142
NC_017268:949543*Treponema pallidum subsp. pallidum str. Chicago chromosome,81.3542 %Subject ←→ Query34.6634
NC_021508:949769*Treponema pallidum subsp. pallidum SS14, complete genome81.0355 %Subject ←→ Query34.8452
NC_016844:107382*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete81.2776 %Subject ←→ Query34.9891
NC_017268:107387*Treponema pallidum subsp. pallidum str. Chicago chromosome,81.2776 %Subject ←→ Query35.0316
NC_000919:948287*Treponema pallidum subsp. pallidum str. Nichols, complete genome81.0815 %Subject ←→ Query35.037
NC_016842:949899*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete78.22 %Subject ←→ Query35.1975
NC_000919:746875Treponema pallidum subsp. pallidum str. Nichols, complete genome79.087 %Subject ←→ Query35.1998
NC_016843:775371*Treponema pallidum subsp. pertenue str. Gauthier chromosome,92.7237 %Subject ←→ Query35.3265
NC_016848:775822*Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete99.0472 %Subject ←→ Query35.369
NC_015714:768500*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome92.6593 %Subject ←→ Query35.483
NC_016844:950231*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete81.3542 %Subject ←→ Query35.5106
NC_016843:950000*Treponema pallidum subsp. pertenue str. Gauthier chromosome,78.174 %Subject ←→ Query35.6176
NC_016844:775334*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete92.6869 %Subject ←→ Query35.8628
NC_021508:775264*Treponema pallidum subsp. pallidum SS14, complete genome99.3781 %Subject ←→ Query36.5637
NC_015714:741044*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome79.6232 %Subject ←→ Query36.7394
NC_016848:950353*Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete78.2261 %Subject ←→ Query36.963
NC_000919:773784Treponema pallidum subsp. pallidum str. Nichols, complete genome99.4638 %Subject ←→ Query36.964
NC_021508:12543*Treponema pallidum subsp. pallidum SS14, complete genome80.1287 %Subject ←→ Query36.9954
NC_016844:12545*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete80.1562 %Subject ←→ Query37.0075
NC_010741:745357Treponema pallidum subsp. pallidum SS14, complete genome80.1379 %Subject ←→ Query37.2477
NC_000919:12545*Treponema pallidum subsp. pallidum str. Nichols, complete genome80.1501 %Subject ←→ Query37.2678
NC_010741:12542*Treponema pallidum subsp. pallidum SS14, complete genome80.144 %Subject ←→ Query37.3966
NC_016848:12548*Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete80.0858 %Subject ←→ Query37.5766
NC_017268:747429*Treponema pallidum subsp. pallidum str. Chicago chromosome,79.4914 %Subject ←→ Query40.7332
NC_021508:745388*Treponema pallidum subsp. pallidum SS14, complete genome80.1195 %Subject ←→ Query41.5767
NC_016848:748873Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete79.1391 %Subject ←→ Query41.8665
NC_016844:748117*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete79.6262 %Subject ←→ Query41.8991
NC_016842:775368*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete97.598 %Subject ←→ Query42.0015
NC_016843:747950*Treponema pallidum subsp. pertenue str. Gauthier chromosome,79.0686 %Subject ←→ Query42.0177