Pre_GI: OUP Neighbours

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Query: NC_017221:1763914 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

D: 28.5782

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora

Number of Neighbours: 66




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_011835:733320Bifidobacterium animalis subsp. lactis AD011 chromosome, complete80.3493 %Subject ←→ Query30.5748
NC_011835:23204Bifidobacterium animalis subsp. lactis AD011 chromosome, complete76.6115 %Subject ←→ Query34.5603
NC_017214:658821Bifidobacterium animalis subsp. lactis BB-12 chromosome, complete76.6176 %Subject ←→ Query30.7526
NC_017214:299637Bifidobacterium animalis subsp. lactis BB-12 chromosome, complete80.046 %Subject ←→ Query35.2427
NC_012814:1599241Bifidobacterium animalis subsp. lactis Bl-04, complete genome79.5282 %Subject ←→ Query32.3379
NC_017216:22454Bifidobacterium animalis subsp. lactis BLC1, complete genome76.633 %Subject ←→ Query35.4268
NC_017216:1603000Bifidobacterium animalis subsp. lactis BLC1, complete genome80.3493 %Subject ←→ Query34.8884
NC_017215:22616Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,76.6789 %Subject ←→ Query35.4429
NC_017215:1605917Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,79.9877 %Subject ←→ Query35.375
NC_012815:1603916Bifidobacterium animalis subsp. lactis DSM 10140, complete genome79.8683 %Subject ←→ Query32.4976
NC_017217:23000Bifidobacterium animalis subsp. lactis V9 chromosome, complete76.6605 %Subject ←→ Query35.1899
NC_017217:1607679Bifidobacterium animalis subsp. lactis V9 chromosome, complete80.0306 %Subject ←→ Query35.3758
NC_014638:1043854*Bifidobacterium bifidum PRL2010 chromosome, complete genome78.3915 %Subject ←→ Query33.99
NC_017218:178564Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome77.9504 %Subject Query39.2719
NC_017218:1655009*Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome76.489 %Subject ←→ Query36.1255
NC_017218:31247Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome77.3591 %Subject ←→ Query34.289
NC_017218:2119964Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome76.8015 %Subject ←→ Query26.968
NC_013714:2294342Bifidobacterium dentium Bd1, complete genome82.3101 %Subject Query48.7653
NC_013714:1830959*Bifidobacterium dentium Bd1, complete genome75.1624 %Subject Query47.5233
NC_010816:1852406Bifidobacterium longum DJO10A, complete genome77.742 %Subject ←→ Query23.1548
NC_004307:1108325Bifidobacterium longum NCC2705, complete genome82.0558 %Subject ←→ Query31.6663
NC_011593:533884Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,79.2892 %Subject ←→ Query30.4482
NC_011593:2288993Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,86.3266 %Subject ←→ Query35.225
NC_011593:1163000*Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,79.5282 %Subject ←→ Query37.0011
NC_017219:2292040Bifidobacterium longum subsp. infantis ATCC 15697, complete genome86.2255 %Subject ←→ Query35.1038
NC_017219:1163000Bifidobacterium longum subsp. infantis ATCC 15697, complete genome79.4914 %Subject ←→ Query36.8449
NC_014656:1829336Bifidobacterium longum subsp. longum BBMN68 chromosome, complete76.8627 %Subject ←→ Query36.8317
NC_014656:1161188Bifidobacterium longum subsp. longum BBMN68 chromosome, complete80.7077 %Subject Query42.0619
NC_014169:2234249*Bifidobacterium longum subsp. longum JDM301 chromosome, complete77.9657 %Subject ←→ Query28.9944
NC_014169:1099024Bifidobacterium longum subsp. longum JDM301 chromosome, complete79.4577 %Subject ←→ Query28.8648
NC_017221:1222963Bifidobacterium longum subsp. longum KACC 91563 chromosome,78.4743 %Subject ←→ Query30.8988
NC_009667:1934818Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence79.7304 %Subject ←→ Query31.3936
NC_019897:3467618Thermobacillus composti KWC4 chromosome, complete genome75.2941 %Subject ←→ Query32.5171