Pre_GI: OUP Neighbours

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Query: NC_017195:1308730 Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete

D: 29.4544

Host Lineage: Bacillus subtilis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism was one of the first bacteria studied, and was named Vibrio subtilis in 1835 and renamed Bacillus subtilis in 1872. It is one of the most well characterized bacterial organisms, and is a model system for cell differentiation and development. This soil bacterium can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the decision to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment through the competence system. The sporulation process is complex and involves the coordinated regulation of hundreds of genes in the genome. This initial step results in the coordinated asymmetric cellular division and endospore formation through multiple stages that produces a single spore from the mother cell.

Number of Neighbours: 218




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_016627:4270949*Clostridium clariflavum DSM 19732 chromosome, complete genome76.9761 %Subject ←→ Query26.3945
UCMB5137:120656Bacillus atrophaeus UCMB-513782.3039 %Subject ←→ Query27.2313
NC_020244:3856526*Bacillus subtilis XF-1, complete genome84.2555 %Subject ←→ Query27.4197
UCMB5137:1159520*Bacillus atrophaeus UCMB-513781.9363 %Subject ←→ Query27.46
NC_013768:1830419Listeria monocytogenes 08-5923, complete genome76.152 %Subject ←→ Query27.5513
NC_020244:3358399Bacillus subtilis XF-1, complete genome77.6409 %Subject ←→ Query27.8332
NC_013766:1859634Listeria monocytogenes 08-5578 chromosome, complete genome76.4522 %Subject ←→ Query27.9035
NC_016627:4203775*Clostridium clariflavum DSM 19732 chromosome, complete genome75.0092 %Subject ←→ Query27.9383
NC_017195:3815491*Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete84.7641 %Subject ←→ Query27.9498
NC_016023:875416Bacillus coagulans 36D1 chromosome, complete genome76.2868 %Subject ←→ Query28.0678
NC_019896:2719456Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete90.7292 %Subject ←→ Query28.504
NC_016791:3891272*Clostridium sp. BNL1100 chromosome, complete genome78.848 %Subject ←→ Query28.7476
NC_019842:3921424*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,79.28 %Subject ←→ Query29.0066
NC_015737:143428Clostridium sp. SY8519, complete genome76.4951 %Subject ←→ Query29.5659
NC_019842:3755275*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,79.5037 %Subject ←→ Query29.819
NC_020244:3681236*Bacillus subtilis XF-1, complete genome76.0968 %Subject ←→ Query29.9378
NC_019896:2805098Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete79.1544 %Subject ←→ Query30.0168
NC_018867:121512Dehalobacter sp. CF chromosome, complete genome75.0429 %Subject ←→ Query30.0725
NC_017188:3900951*Bacillus amyloliquefaciens TA208 chromosome, complete genome77.4877 %Subject ←→ Query30.2742
NC_020272:1384525Bacillus amyloliquefaciens IT-45, complete genome76.6728 %Subject ←→ Query30.5835
NC_017191:3901914*Bacillus amyloliquefaciens XH7 chromosome, complete genome78.2966 %Subject ←→ Query30.9612
NC_006270:2850354Bacillus licheniformis ATCC 14580, complete genome80.5852 %Subject ←→ Query31.3655
NC_017188:753039*Bacillus amyloliquefaciens TA208 chromosome, complete genome79.7518 %Subject ←→ Query31.5375
NC_021184:3533500Desulfotomaculum gibsoniae DSM 7213, complete genome80.0153 %Subject ←→ Query31.6644
NC_014219:2284000Bacillus selenitireducens MLS10 chromosome, complete genome75.3309 %Subject ←→ Query31.7181
NC_012781:3315614Eubacterium rectale ATCC 33656, complete genome76.7157 %Subject ←→ Query31.8893
NC_014219:2875051*Bacillus selenitireducens MLS10 chromosome, complete genome76.5564 %Subject ←→ Query31.9036
NC_014376:1842290*Clostridium saccharolyticum WM1 chromosome, complete genome75.1409 %Subject ←→ Query31.9269
NC_014219:894829Bacillus selenitireducens MLS10 chromosome, complete genome76.2837 %Subject ←→ Query32.4875
NC_019842:3852062*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,78.7531 %Subject ←→ Query32.6161
NC_006270:1415001Bacillus licheniformis ATCC 14580, complete genome80.0674 %Subject ←→ Query32.7449
NC_017191:754453*Bacillus amyloliquefaciens XH7 chromosome, complete genome80.1746 %Subject ←→ Query32.7778
NC_017188:177500*Bacillus amyloliquefaciens TA208 chromosome, complete genome78.3088 %Subject ←→ Query32.9037
NC_012491:3088500Brevibacillus brevis NBRC 100599, complete genome76.7923 %Subject ←→ Query32.9432
NC_020410:3801583*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete77.7604 %Subject ←→ Query33.0165
NC_014219:2491021Bacillus selenitireducens MLS10 chromosome, complete genome79.9939 %Subject ←→ Query33.0881
NC_015520:2974048Mahella australiensis 50-1 BON chromosome, complete genome79.9479 %Subject ←→ Query33.3024
NC_017191:183500*Bacillus amyloliquefaciens XH7 chromosome, complete genome78.3027 %Subject ←→ Query33.4022
NC_019842:680000*Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,75.2574 %Subject ←→ Query33.4894
NC_019842:2575000Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,76.6452 %Subject ←→ Query33.5157
NC_014483:1973233*Paenibacillus polymyxa E681 chromosome, complete genome75.6281 %Subject ←→ Query33.5725
NC_014624:2549219Eubacterium limosum KIST612 chromosome, complete genome78.7898 %Subject ←→ Query33.6363
NC_014483:3235968Paenibacillus polymyxa E681 chromosome, complete genome76.7249 %Subject ←→ Query33.7397
NC_015737:53682*Clostridium sp. SY8519, complete genome76.3879 %Subject ←→ Query33.7444
NC_020410:198000*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete79.1085 %Subject ←→ Query34.0295
NC_014624:2569604Eubacterium limosum KIST612 chromosome, complete genome77.7083 %Subject ←→ Query34.0437
NC_019842:1919866Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,81.8842 %Subject ←→ Query34.091
NC_006322:1994000Bacillus licheniformis ATCC 14580, complete genome76.7647 %Subject ←→ Query34.2412
NC_014483:1179286Paenibacillus polymyxa E681 chromosome, complete genome76.0049 %Subject ←→ Query34.2701
NC_017188:3764061Bacillus amyloliquefaciens TA208 chromosome, complete genome75.2328 %Subject ←→ Query34.2893
NC_014622:5683400*Paenibacillus polymyxa SC2 chromosome, complete genome76.5165 %Subject ←→ Query34.4297
NC_016627:4323370*Clostridium clariflavum DSM 19732 chromosome, complete genome79.0349 %Subject ←→ Query34.4514
NC_014624:140000Eubacterium limosum KIST612 chromosome, complete genome77.0251 %Subject ←→ Query34.4784
NC_017191:3766960Bacillus amyloliquefaciens XH7 chromosome, complete genome75.4381 %Subject ←→ Query34.5397
NC_020410:1856376Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete81.587 %Subject ←→ Query34.5972
NC_017191:2514401*Bacillus amyloliquefaciens XH7 chromosome, complete genome79.7825 %Subject ←→ Query34.7256
NC_017068:1216548Selenomonas ruminantium subsp. lactilytica TAM6421, complete75.0398 %Subject ←→ Query34.755
NC_017068:2055500Selenomonas ruminantium subsp. lactilytica TAM6421, complete76.2408 %Subject ←→ Query34.8249
NC_014622:5662000Paenibacillus polymyxa SC2 chromosome, complete genome77.0527 %Subject ←→ Query34.8299
NC_014624:3316916Eubacterium limosum KIST612 chromosome, complete genome75.0214 %Subject ←→ Query34.8711
NC_011060:330437*Pelodictyon phaeoclathratiforme BU-1, complete genome76.6023 %Subject ←→ Query34.8821
NC_017190:3812065Bacillus amyloliquefaciens LL3 chromosome, complete genome75.4167 %Subject ←→ Query35.0987
NC_015634:959396Bacillus coagulans 2-6 chromosome, complete genome77.644 %Subject ←→ Query35.0988
NC_017190:794820*Bacillus amyloliquefaciens LL3 chromosome, complete genome80.1685 %Subject ←→ Query35.3956
NC_016641:1530905*Paenibacillus terrae HPL-003 chromosome, complete genome76.6115 %Subject ←→ Query35.3984
NC_015737:1337605Clostridium sp. SY8519, complete genome77.6103 %Subject ←→ Query35.7856
NC_015977:2280834Roseburia hominis A2-183 chromosome, complete genome75.9161 %Subject ←→ Query35.8037
NC_006270:1119000Bacillus licheniformis ATCC 14580, complete genome79.905 %Subject ←→ Query35.8396
NC_015737:449914Clostridium sp. SY8519, complete genome76.7616 %Subject ←→ Query35.9497
NC_016641:2476634Paenibacillus terrae HPL-003 chromosome, complete genome77.114 %Subject ←→ Query35.9497
NC_016641:5729308Paenibacillus terrae HPL-003 chromosome, complete genome78.7163 %Subject ←→ Query36.1077
NC_020272:20435Bacillus amyloliquefaciens IT-45, complete genome75.0521 %Subject ←→ Query36.4827
NC_016641:2950000Paenibacillus terrae HPL-003 chromosome, complete genome76.1274 %Subject ←→ Query36.5495
NC_016641:3217201*Paenibacillus terrae HPL-003 chromosome, complete genome76.394 %Subject ←→ Query36.6474
NC_016641:2700765Paenibacillus terrae HPL-003 chromosome, complete genome79.8468 %Subject ←→ Query36.6671
NC_006270:2172693*Bacillus licheniformis ATCC 14580, complete genome80.6219 %Subject ←→ Query36.7478
NC_017188:2512357Bacillus amyloliquefaciens TA208 chromosome, complete genome79.0104 %Subject ←→ Query36.8106
NC_020272:84227*Bacillus amyloliquefaciens IT-45, complete genome75.7108 %Subject ←→ Query36.8169
NC_019842:2134803Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,77.4173 %Subject ←→ Query36.8282
NC_016641:4151403Paenibacillus terrae HPL-003 chromosome, complete genome76.4062 %Subject ←→ Query36.8639
NC_016791:3953972*Clostridium sp. BNL1100 chromosome, complete genome80.337 %Subject ←→ Query37.1028
NC_015977:3324000*Roseburia hominis A2-183 chromosome, complete genome79.0748 %Subject ←→ Query37.2295
NC_014622:3525017Paenibacillus polymyxa SC2 chromosome, complete genome77.1324 %Subject ←→ Query37.2902
NC_017190:182449*Bacillus amyloliquefaciens LL3 chromosome, complete genome78.171 %Subject ←→ Query37.5182
NC_014622:2477019Paenibacillus polymyxa SC2 chromosome, complete genome77.0711 %Subject ←→ Query37.5615
NC_015977:2445835*Roseburia hominis A2-183 chromosome, complete genome77.4173 %Subject ←→ Query38.0533
NC_017190:591139Bacillus amyloliquefaciens LL3 chromosome, complete genome82.6164 %Subject ←→ Query38.1402
NC_012491:4692667Brevibacillus brevis NBRC 100599, complete genome75.6097 %Subject ←→ Query38.4272
NC_016641:945284Paenibacillus terrae HPL-003 chromosome, complete genome78.3609 %Subject ←→ Query38.5594
NC_017188:3839478*Bacillus amyloliquefaciens TA208 chromosome, complete genome77.2212 %Subject ←→ Query38.7965
NC_017195:709098*Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete79.3536 %Subject ←→ Query38.9249
NC_008023:1070986*Streptococcus pyogenes MGAS2096, complete genome76.155 %Subject ←→ Query39.0651
NC_014624:1840209*Eubacterium limosum KIST612 chromosome, complete genome75.7567 %Subject ←→ Query39.1048
NC_016641:5926000*Paenibacillus terrae HPL-003 chromosome, complete genome78.701 %Subject ←→ Query39.178
NC_016048:4163225Oscillibacter valericigenes Sjm18-20, complete genome75.9467 %Subject ←→ Query39.4452
NC_017191:3841170*Bacillus amyloliquefaciens XH7 chromosome, complete genome77.258 %Subject Query39.5317
NC_016048:2907702*Oscillibacter valericigenes Sjm18-20, complete genome80.0214 %Subject Query39.698
NC_020244:1335531Bacillus subtilis XF-1, complete genome91.1366 %Subject Query39.7222
NC_014622:4361553*Paenibacillus polymyxa SC2 chromosome, complete genome76.1612 %Subject Query40.1621
NC_016641:872394*Paenibacillus terrae HPL-003 chromosome, complete genome75.4105 %Subject Query41.9078
NC_018870:757416*Thermacetogenium phaeum DSM 12270 chromosome, complete genome78.0178 %Subject Query42.0622
NC_020410:1301500Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete76.5165 %Subject Query42.4347
NC_019903:1312843*Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,78.4743 %Subject Query42.9922
NC_009706:3882500*Clostridium kluyveri DSM 555 chromosome, complete genome76.6697 %Subject Query43.1645
NC_011837:3814000*Clostridium kluyveri NBRC 12016, complete genome76.6851 %Subject Query43.193
NC_020410:3868573*Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete78.9093 %Subject Query43.367
NC_015977:3011177Roseburia hominis A2-183 chromosome, complete genome77.0895 %Subject Query44.0829
NC_015977:935798*Roseburia hominis A2-183 chromosome, complete genome75.1869 %Subject Query44.2207
NC_010803:2474554Chlorobium limicola DSM 245, complete genome77.1385 %Subject Query44.7864