Pre_GI: OUP Neighbours

Some Help

Query: NC_016894:77853 Acetobacterium woodii DSM 1030 chromosome, complete genome

D: 34.0577

Host Lineage: Acetobacterium woodii; Acetobacterium; Eubacteriaceae; Clostridiales; Firmicutes; Bacteria

General Information: Acetobacterium woodii is a Gram positive, motile, strict anaerobic, acetogenic bacterium, that relies on Na+ as coupling ion in bioenergetic reactions. The organism can use a wide range of substrates, such as sugars, alcohols, methoxylated aromatic acids or C1 compounds. Electrons derived from these electron donors are used in the Wood-Ljungdahl-pathway where the organism fixes CO2 and produces acetate. The pathway of CO2-fixation is coupled to energy conservation via a chemiosmotic mechanism, one enzyme that seems to be involved is the Rnf complex. The produced Na+ gradient can be used to drive ATP-synthesis or flagella rotation. The ATP synthase is a member of the F1FO class of enzymes and has an unusual hybrid rotor. Can use alternative electron acceptors like the lignin degradation product caffeate.

Number of Neighbours: 68

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Select all Donors or Recipients for Query Island

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_016894:2931213*Acetobacterium woodii DSM 1030 chromosome, complete genome85.5147 %Subject Query22.8052
NC_016894:1092005*Acetobacterium woodii DSM 1030 chromosome, complete genome86.4124 %Subject ←→ Query24.1184
NC_007503:1486000Carboxydothermus hydrogenoformans Z-2901, complete genome76.5564 %Subject ←→ Query25.2756
NC_008497:32160Lactobacillus brevis ATCC 367, complete genome76.0172 %Subject ←→ Query26.6719
NC_016894:3114394Acetobacterium woodii DSM 1030 chromosome, complete genome83.5938 %Subject ←→ Query26.8405
NC_008497:79144*Lactobacillus brevis ATCC 367, complete genome77.2028 %Subject ←→ Query27.061
UCMB5137:1834999Bacillus atrophaeus UCMB-513775.0031 %Subject ←→ Query27.1036
NC_008497:556365*Lactobacillus brevis ATCC 367, complete genome77.3652 %Subject ←→ Query27.4289
NC_018528:1932000Lactobacillus helveticus R0052 chromosome, complete genome77.1936 %Subject ←→ Query27.4908
NC_008497:447427*Lactobacillus brevis ATCC 367, complete genome75.7629 %Subject ←→ Query27.6386
NC_016894:3935161Acetobacterium woodii DSM 1030 chromosome, complete genome77.1752 %Subject ←→ Query28.6114
NC_016894:3527364Acetobacterium woodii DSM 1030 chromosome, complete genome83.4406 %Subject ←→ Query29.1005
NC_014554:337268Lactobacillus plantarum subsp. plantarum ST-III chromosome,77.9933 %Subject ←→ Query29.7285
NC_016894:377446*Acetobacterium woodii DSM 1030 chromosome, complete genome84.326 %Subject ←→ Query29.7292
NC_021184:4524500*Desulfotomaculum gibsoniae DSM 7213, complete genome75.5699 %Subject ←→ Query30.6755
NC_007520:1940120*Thiomicrospira crunogena XCL-2, complete genome75.337 %Subject ←→ Query31.019
NC_016894:3329562*Acetobacterium woodii DSM 1030 chromosome, complete genome84.375 %Subject ←→ Query31.2239
NC_007576:1854136*Lactobacillus sakei subsp. sakei 23K, complete genome77.0956 %Subject ←→ Query31.3415
NC_015703:1992000*Runella slithyformis DSM 19594 chromosome, complete genome75.6832 %Subject ←→ Query31.5564
NC_016609:3576490Niastella koreensis GR20-10 chromosome, complete genome76.4124 %Subject ←→ Query32.1473
NC_007576:1747662*Lactobacillus sakei subsp. sakei 23K, complete genome75.8701 %Subject ←→ Query32.1833
NC_014554:1019730Lactobacillus plantarum subsp. plantarum ST-III chromosome,75.5729 %Subject ←→ Query32.3869
NC_015520:2821406Mahella australiensis 50-1 BON chromosome, complete genome76.6759 %Subject ←→ Query32.9861
NC_014624:2878457Eubacterium limosum KIST612 chromosome, complete genome75.239 %Subject ←→ Query33.5816
NC_008497:1498430*Lactobacillus brevis ATCC 367, complete genome76.9301 %Subject ←→ Query35.4937
NC_017190:871352Bacillus amyloliquefaciens LL3 chromosome, complete genome77.9136 %Subject ←→ Query35.6367
NC_016610:2489415*Tannerella forsythia ATCC 43037 chromosome, complete genome76.5288 %Subject ←→ Query35.7292
NC_014624:1768226Eubacterium limosum KIST612 chromosome, complete genome80.4136 %Subject ←→ Query35.9105
NC_017190:852171Bacillus amyloliquefaciens LL3 chromosome, complete genome75.6526 %Subject ←→ Query37.3966
NC_016641:2894899Paenibacillus terrae HPL-003 chromosome, complete genome77.1385 %Subject ←→ Query37.4094
NC_015428:823420*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome75.8149 %Subject ←→ Query37.54
NC_015428:700479*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome75.4688 %Subject ←→ Query38.8838
NC_017188:2221705Bacillus amyloliquefaciens TA208 chromosome, complete genome77.5858 %Subject ←→ Query39.9662
NC_017191:2223740Bacillus amyloliquefaciens XH7 chromosome, complete genome77.6593 %Subject ←→ Query41.0813