Pre_GI: OUP Neighbours

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Query: NC_016894:3527364 Acetobacterium woodii DSM 1030 chromosome, complete genome

D: 29.1005

Host Lineage: Acetobacterium woodii; Acetobacterium; Eubacteriaceae; Clostridiales; Firmicutes; Bacteria

General Information: Acetobacterium woodii is a Gram positive, motile, strict anaerobic, acetogenic bacterium, that relies on Na+ as coupling ion in bioenergetic reactions. The organism can use a wide range of substrates, such as sugars, alcohols, methoxylated aromatic acids or C1 compounds. Electrons derived from these electron donors are used in the Wood-Ljungdahl-pathway where the organism fixes CO2 and produces acetate. The pathway of CO2-fixation is coupled to energy conservation via a chemiosmotic mechanism, one enzyme that seems to be involved is the Rnf complex. The produced Na+ gradient can be used to drive ATP-synthesis or flagella rotation. The ATP synthase is a member of the F1FO class of enzymes and has an unusual hybrid rotor. Can use alternative electron acceptors like the lignin degradation product caffeate.

Number of Neighbours: 8




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_007503:1486000Carboxydothermus hydrogenoformans Z-2901, complete genome76.4675 %Subject ←→ Query25.2756
NC_009253:1265474Desulfotomaculum reducens MI-1 chromosome, complete genome75.2512 %Subject ←→ Query29.0947
NC_015520:2821406Mahella australiensis 50-1 BON chromosome, complete genome76.9179 %Subject ←→ Query32.9861
NC_016894:77853Acetobacterium woodii DSM 1030 chromosome, complete genome83.4406 %Subject ←→ Query34.0577