Pre_GI: OUP Neighbours

Some Help

Query: NC_016445:89500 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

D: 34.6333

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.

Number of Neighbours: 96




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_017162:1228723Acinetobacter baumannii 1656-2 chromosome, complete genome75.6373 %Subject ←→ Query39.8739
NC_010611:240839Acinetobacter baumannii ACICU, complete genome77.5245 %Subject ← Query48.2217
NC_015554:4724245*Alteromonas sp. SN2 chromosome, complete genome77.6808 %Subject ←→ Query42.0329
NC_015554:3964000Alteromonas sp. SN2 chromosome, complete genome75.4963 %Subject ←→ Query40.739
NC_018697:1343756*Cycloclasticus sp. P1 chromosome, complete genome75 %Subject ←→ Query28.198
NC_013037:6281164*Dyadobacter fermentans DSM 18053, complete genome75.3033 %Subject ← Query45.9244
NC_011742:2489000Escherichia coli S88 chromosome, complete genome75.2512 %Subject ←→ Query33.4382
NC_014394:1626699Gallionella capsiferriformans ES-2 chromosome, complete genome75.4933 %Subject ←→ Query33.8875
NC_014366:478000*Gamma proteobacterium HdN1, complete genome77.3683 %Subject ←→ Query28.2485
NC_007645:3581114Hahella chejuensis KCTC 2396, complete genome77.258 %Subject ←→ Query35.9091
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome76.7279 %Subject ←→ Query28.9383
NC_014334:99000*Lactobacillus casei str. Zhang chromosome, complete genome77.3713 %Subject ←→ Query29.7551
NC_014334:267409*Lactobacillus casei str. Zhang chromosome, complete genome75.0153 %Subject ←→ Query35.3356
NC_014334:1848340*Lactobacillus casei str. Zhang chromosome, complete genome77.6501 %Subject ←→ Query27.6265
NC_010999:2450974*Lactobacillus casei, complete genome77.6838 %Subject ←→ Query28.2344
NC_013198:511795Lactobacillus rhamnosus GG, complete genome75.4841 %Subject ←→ Query31.25
NC_013199:1966334*Lactobacillus rhamnosus Lc 705, complete genome77.4203 %Subject ←→ Query31.9404
NC_015276:2023663Marinomonas mediterranea MMB-1 chromosome, complete genome75.5055 %Subject ←→ Query34.0303
NC_016112:1330500*Methylomicrobium alcaliphilum chromosome, complete genome75.6311 %Subject ←→ Query34.6108
NC_015572:4916430Methylomonas methanica MC09 chromosome, complete genome78.0362 %Subject ←→ Query37.6362
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome80.7384 %Subject ←→ Query34.0009
NC_010554:2646806Proteus mirabilis HI4320, complete genome81.5227 %Subject ←→ Query35.3988
NC_011083:1524337Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,77.114 %Subject ←→ Query31.3351
NC_009052:3229775Shewanella baltica OS155, complete genome75.1134 %Subject ←→ Query27.5596
NC_004349:3938Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence76.3143 %Subject ←→ Query38.1809
NC_008577:4183361Shewanella sp. ANA-3 chromosome 1, complete sequence77.1875 %Subject ←→ Query32.7699
NC_008573:195317Shewanella sp. ANA-3 plasmid 1, complete sequence79.4608 %Subject ← Query46.5154
NC_016945:666000Vibrio cholerae IEC224 chromosome II, complete sequence77.6685 %Subject ←→ Query31.171
NC_016945:207089*Vibrio cholerae IEC224 chromosome II, complete sequence79.0441 %Subject ←→ Query38.0893
NC_017270:1755552*Vibrio cholerae LMA3984-4 chromosome chromosome I, complete75.7567 %Subject ←→ Query28.6114
NC_012580:207025*Vibrio cholerae M66-2 chromosome II, complete sequence79.0533 %Subject ←→ Query36.8634
NC_012668:160357Vibrio cholerae MJ-1236 chromosome 1, complete sequence76.1091 %Subject ←→ Query36.6506
NC_012667:46432*Vibrio cholerae MJ-1236 chromosome 2, complete genome77.3438 %Subject ←→ Query35.9314
NC_002505:168532Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.4062 %Subject ←→ Query38.3098
NC_002506:207097*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete79.0533 %Subject ←→ Query37.898
NC_016446:979884*Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete79.0165 %Subject ←→ Query37.3254
NC_009456:998935*Vibrio cholerae O395 chromosome 1, complete sequence81.0202 %Subject ←→ Query36.0218
NC_012583:242760*Vibrio cholerae O395 chromosome chromosome II, complete sequence79.712 %Subject ←→ Query36.9645
NC_016602:2854107Vibrio furnissii NCTC 11218 chromosome 1, complete sequence76.7341 %Subject ←→ Query39.7191
NC_016602:2292518Vibrio furnissii NCTC 11218 chromosome 1, complete sequence77.4479 %Subject ←→ Query37.1565
NC_016628:763833Vibrio furnissii NCTC 11218 chromosome 2, complete sequence75.7445 %Subject ←→ Query43.5211
NC_016628:537137Vibrio furnissii NCTC 11218 chromosome 2, complete sequence75.6189 %Subject ←→ Query39.9714
NC_004459:1794540*Vibrio vulnificus CMCP6 chromosome I, complete sequence75.0888 %Subject ←→ Query31.6148
NC_004460:973738Vibrio vulnificus CMCP6 chromosome II, complete sequence78.4528 %Subject ←→ Query30.5138
NC_004460:1237129Vibrio vulnificus CMCP6 chromosome II, complete sequence76.7647 %Subject ←→ Query33.7123
NC_014966:795311Vibrio vulnificus MO6-24/O chromosome II, complete sequence76.1887 %Subject ←→ Query29.8334
NC_014966:638355Vibrio vulnificus MO6-24/O chromosome II, complete sequence77.0466 %Subject ←→ Query28.049
NC_005140:1820970Vibrio vulnificus YJ016 chromosome II, complete sequence76.2898 %Subject ←→ Query27.8788