Pre_GI: OUP Neighbours

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Query: NC_015975:1936504 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

D: 33.1165

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

Number of Neighbours: 41




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_002570:1220180Bacillus halodurans C-125, complete genome75.4167 %Subject ←→ Query30.258
NC_006322:4048990Bacillus licheniformis ATCC 14580, complete genome76.2102 %Subject ←→ Query32.0525
NC_006322:2886404*Bacillus licheniformis ATCC 14580, complete genome76.1213 %Subject ←→ Query31.3686
NC_010556:691498*Exiguobacterium sibiricum 255-15, complete genome76.4553 %Subject ←→ Query34.0933
NC_010556:6612*Exiguobacterium sibiricum 255-15, complete genome75.2512 %Subject ←→ Query37.1261
NC_006510:310212*Geobacillus kaustophilus HTA426, complete genome75.9375 %Subject ←→ Query37.0244
NC_006510:1731939*Geobacillus kaustophilus HTA426, complete genome75.2267 %Subject ←→ Query41.4725
NC_006510:2778777Geobacillus kaustophilus HTA426, complete genome76.8474 %Subject ←→ Query31.9066
NC_006510:1400000*Geobacillus kaustophilus HTA426, complete genome76.6697 %Subject ←→ Query38.8011
NC_006510:2110430Geobacillus kaustophilus HTA426, complete genome76.6973 %Subject ←→ Query29.4869
NC_006510:2044347Geobacillus kaustophilus HTA426, complete genome77.0925 %Subject ←→ Query36.7248
NC_006510:1995916Geobacillus kaustophilus HTA426, complete genome75.3094 %Subject ←→ Query31.0693
NC_006510:1921541Geobacillus kaustophilus HTA426, complete genome76.5502 %Subject ←→ Query30.4934
NC_006510:1901954Geobacillus kaustophilus HTA426, complete genome75.0766 %Subject ←→ Query30.262
NC_012793:3243727Geobacillus sp. WCH70, complete genome76.0754 %Subject ←→ Query33.5494
NC_014915:308056*Geobacillus sp. Y412MC52 chromosome, complete genome75.4994 %Subject ←→ Query30.3414
NC_014915:2963500Geobacillus sp. Y412MC52 chromosome, complete genome77.6654 %Subject ←→ Query36.3336
NC_014915:2092678Geobacillus sp. Y412MC52 chromosome, complete genome77.0925 %Subject ←→ Query33.7161
NC_014915:1909275Geobacillus sp. Y412MC52 chromosome, complete genome76.826 %Subject ←→ Query36.0595
NC_014915:1880748Geobacillus sp. Y412MC52 chromosome, complete genome76.538 %Subject ←→ Query30.9399
NC_013411:597235Geobacillus sp. Y412MC61, complete genome77.1691 %Subject ←→ Query35.813
NC_013411:2975364Geobacillus sp. Y412MC61, complete genome75.6219 %Subject ←→ Query35.9085
NC_013411:2951559Geobacillus sp. Y412MC61, complete genome76.9026 %Subject ←→ Query26.0731
NC_013411:2767400Geobacillus sp. Y412MC61, complete genome76.3603 %Subject ←→ Query32.8925
NC_013411:2739989Geobacillus sp. Y412MC61, complete genome77.5368 %Subject ←→ Query28.6055
NC_013411:1168049*Geobacillus sp. Y412MC61, complete genome75.4994 %Subject ←→ Query30.6232
NC_010337:803748Heliobacterium modesticaldum Ice1, complete genome76.0601 %Subject Query48.9344
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome75.5821 %Subject ←→ Query28.9383
NC_013199:811929*Lactobacillus rhamnosus Lc 705, complete genome75.2206 %Subject ←→ Query39.2072
NC_013199:2536705*Lactobacillus rhamnosus Lc 705, complete genome76.2653 %Subject ←→ Query37.5527
NC_015975:441580*Lactobacillus ruminis ATCC 27782 chromosome, complete genome85.2083 %Subject ←→ Query32.2212
NC_015975:267994*Lactobacillus ruminis ATCC 27782 chromosome, complete genome86.9056 %Subject ←→ Query36.1625
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome75.7414 %Subject ←→ Query34.0009
NC_015572:4916430Methylomonas methanica MC09 chromosome, complete genome75.2083 %Subject ←→ Query37.6362
NC_015572:4209000*Methylomonas methanica MC09 chromosome, complete genome75.4871 %Subject ←→ Query40.0218
NC_012914:1824955Paenibacillus sp. JDR-2, complete genome75.6066 %Subject ←→ Query31.1862
NC_013406:7092510*Paenibacillus sp. Y412MC10 chromosome, complete genome75.095 %Subject ←→ Query32.5359
NC_013406:4023367Paenibacillus sp. Y412MC10 chromosome, complete genome75.3646 %Subject ←→ Query29.6966
NC_013406:4000518Paenibacillus sp. Y412MC10 chromosome, complete genome77.163 %Subject ←→ Query31.2804
NC_013406:3650300Paenibacillus sp. Y412MC10 chromosome, complete genome77.0374 %Subject ←→ Query34.0613
NC_007520:2391675Thiomicrospira crunogena XCL-2, complete genome76.8413 %Subject ←→ Query26.1369