Pre_GI: OUP Neighbours

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Query: NC_015590:1425628 Sinorhizobium meliloti AK83 chromosome 1, complete sequence

D: 24.0637

Host Lineage: Sinorhizobium meliloti; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Environment: Host, Plant root, Root nodule, Soil; Temp: Mesophile; Temp: 25 - 30C. This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, in this case the alfalfa plant (Medicago sativa). Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.

Number of Neighbours: 10

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_016631:3434963Granulicella mallensis MP5ACTX8 chromosome, complete genome76.489 %Subject ←→ Query26.7814
NC_016631:3917253*Granulicella mallensis MP5ACTX8 chromosome, complete genome76.2316 %Subject ←→ Query27.6234
NC_016631:4113794*Granulicella mallensis MP5ACTX8 chromosome, complete genome75.5668 %Subject ←→ Query29.6753
NC_021172:3655206*Hyphomicrobium denitrificans 1NES1, complete genome81.8811 %Subject ←→ Query30.5639
NC_013720:5769910*Pirellula staleyi DSM 6068, complete genome75.2267 %Subject Query35.2722