Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_013893:359842 Staphylococcus lugdunensis HKU09-01 chromosome, complete genome

D: 24.2742

Host Lineage: Staphylococcus lugdunensis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: Complete genome sequencing of Staphylococcus lugdunensis strain HKU09-01 isolated from a patient suffering from skin and soft tissue infection. Staphylococcus lugdunensis is known to be a pathogenic member of the coagulase-negative staphylococci, causing skin and soft tissue infections, catheter-related bacteremia, native valve endocardititis and osteomyelitis.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_017341:1482882Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Subject ←→ Query18.0843
NC_009641:2357468*Staphylococcus aureus subsp. aureus str. Newman chromosome,Subject ←→ Query18.4004
NC_017341:2384736*Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Subject ←→ Query18.7591
NC_017347:2350802*Staphylococcus aureus subsp. aureus T0131 chromosome, completeSubject ←→ Query18.8716
NC_020164:2329340Staphylococcus warneri SG1, complete genomeSubject ←→ Query18.8848
NC_017343:16000*Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeSubject ←→ Query18.9317
NC_017342:1012555*Staphylococcus aureus subsp. aureus TCH60 chromosome, completeSubject ←→ Query19.2202
NC_017337:2319847*Staphylococcus aureus subsp. aureus ED133 chromosome, completeSubject ←→ Query19.3185
NC_017025:1278374Flavobacterium indicum GPTSA100-9, complete genomeSubject ←→ Query19.4911
NC_017338:1419500Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeSubject ←→ Query19.6376
NC_016928:16869*Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query19.6489
NC_009641:15421*Staphylococcus aureus subsp. aureus str. Newman chromosome,Subject ←→ Query19.8502
NC_017353:825856*Staphylococcus lugdunensis N920143, complete genomeSubject ←→ Query19.8856
NC_016928:561138*Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query19.8974
NC_009632:2391397*Staphylococcus aureus subsp. aureus JH1 chromosome, completeSubject ←→ Query19.9082
NC_017343:566000Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeSubject ←→ Query19.9274
NC_013450:1446952Staphylococcus aureus subsp. aureus ED98, complete genomeSubject ←→ Query19.9805
NC_017347:586629*Staphylococcus aureus subsp. aureus T0131 chromosome, completeSubject ←→ Query20.0314
NC_002973:1846000*Listeria monocytogenes str. 4b F2365, complete genomeSubject ←→ Query20.0663
NC_017338:14886*Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeSubject ←→ Query20.087
NC_009487:2390713*Staphylococcus aureus subsp. aureus JH9 chromosome, completeSubject ←→ Query20.0936
NC_017351:1464209*Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeSubject ←→ Query20.2004
NC_017337:1478448Staphylococcus aureus subsp. aureus ED133 chromosome, completeSubject ←→ Query20.2389
NC_017341:591952*Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Subject ←→ Query20.3509
NC_017338:588983Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeSubject ←→ Query20.3935
NC_017347:1483163Staphylococcus aureus subsp. aureus T0131 chromosome, completeSubject ←→ Query20.395
NC_016912:1374351Staphylococcus aureus subsp. aureus VC40 chromosome, completeSubject ←→ Query20.659
NC_016941:2234937*Staphylococcus aureus subsp. aureus MSHR1132, complete genomeSubject ←→ Query20.6638
NC_009487:1557248Staphylococcus aureus subsp. aureus JH9 chromosome, completeSubject ←→ Query20.6773
NC_016928:2249907*Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query20.8607
NC_018704:2149229*Amphibacillus xylanus NBRC 15112, complete genomeSubject ←→ Query21.0816
NC_016941:1411500Staphylococcus aureus subsp. aureus MSHR1132, complete genomeSubject ←→ Query21.0907
NC_017343:2212780*Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeSubject ←→ Query21.0968
NC_016928:1440319Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query21.1409
NC_009632:1557122Staphylococcus aureus subsp. aureus JH1 chromosome, completeSubject ←→ Query21.1614
NC_016912:2170615*Staphylococcus aureus subsp. aureus VC40 chromosome, completeSubject ←→ Query21.2001
NC_009632:640973Staphylococcus aureus subsp. aureus JH1 chromosome, completeSubject ←→ Query21.6243
NC_013766:757987Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query21.6318
NC_015759:536929*Weissella koreensis KACC 15510 chromosome, complete genomeSubject ←→ Query21.6744
NC_016052:842762Tetragenococcus halophilus NBRC 12172, complete genomeSubject ←→ Query21.9417
NC_013766:1202713Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query21.9875
NC_013766:906550Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query22.0057
NC_017343:1391124Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeSubject ←→ Query22.0132
NC_011660:2924397Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query22.0817
NC_003210:721824Listeria monocytogenes EGD-e, complete genomeSubject ←→ Query22.1346
NC_013768:1983711Listeria monocytogenes 08-5923, complete genomeSubject ←→ Query22.2499
NC_009641:1470500Staphylococcus aureus subsp. aureus str. Newman chromosome,Subject ←→ Query22.2601
NC_012488:453431Listeria monocytogenes Clip81459, complete genomeSubject ←→ Query22.4617
NC_011660:724711*Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query22.6167
NC_002973:730942Listeria monocytogenes str. 4b F2365, complete genomeSubject ←→ Query22.6302
NC_017316:2466244*Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query22.7274
NC_020164:701151*Staphylococcus warneri SG1, complete genomeSubject ←→ Query22.7599
NC_010519:445936Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query23.2855
NC_013766:679906Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query23.3402
NC_004668:191732*Enterococcus faecalis V583, complete genomeSubject ←→ Query23.4497
NC_011660:1889504Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query23.6169
NC_012488:1159463Listeria monocytogenes Clip81459, complete genomeSubject ←→ Query23.6635
NC_013768:721897Listeria monocytogenes 08-5923, complete genomeSubject ←→ Query23.7536
NC_017316:2710021*Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query23.7547
NC_010519:1802294*Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query24.1488
NC_013893:359842Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeSubject ←→ Query24.2742
NC_017353:505935Staphylococcus lugdunensis N920143, complete genomeSubject ←→ Query24.6924
NC_011660:2756860Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query24.8401
NC_017316:2637707Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query24.8589
NC_010519:796229Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query25.037
NC_012121:2218500Staphylococcus carnosus subsp. carnosus TM300, complete genomeSubject ←→ Query25.2447
NC_010519:2033980*Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query25.683
NC_016928:589223*Staphylococcus aureus subsp. aureus M013 chromosome, completeSubject ←→ Query25.7285
NC_015603:1Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequenceSubject ←→ Query26.2642
NC_017342:1848031Staphylococcus aureus subsp. aureus TCH60 chromosome, completeSubject ←→ Query26.3068
NC_010519:71365Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query26.3581
NC_020164:1356798Staphylococcus warneri SG1, complete genomeSubject ←→ Query26.4369
NC_010519:1165418Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query26.5151
NC_015277:4269399Sphingobacterium sp. 21 chromosome, complete genomeSubject ←→ Query26.7631
NC_011660:366000Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query26.8414
NC_010519:416658*Haemophilus somnus 2336 chromosome, complete genomeSubject ←→ Query27.2413
NC_012793:3035978Geobacillus sp. WCH70, complete genomeSubject ←→ Query27.2556
NC_012488:732233Listeria monocytogenes Clip81459, complete genomeSubject ←→ Query27.4501
NC_017316:2581781*Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query27.6154
NC_013766:417991Listeria monocytogenes 08-5578 chromosome, complete genomeSubject ←→ Query28.129
NC_013768:418000Listeria monocytogenes 08-5923, complete genomeSubject ←→ Query28.129
NC_004668:3118500Enterococcus faecalis V583, complete genomeSubject ←→ Query28.4525
NC_007793:1451409Staphylococcus aureus subsp. aureus USA300, complete genomeSubject ←→ Query28.476
NC_009641:1979053Staphylococcus aureus subsp. aureus str. Newman chromosome,Subject ←→ Query28.638
NC_016052:1818659Tetragenococcus halophilus NBRC 12172, complete genomeSubject ←→ Query28.6557
NC_017138:980696*Bacillus megaterium WSH-002 chromosome, complete genomeSubject ←→ Query28.7972
NC_002758:1508996Staphylococcus aureus subsp. aureus Mu50, complete genomeSubject ←→ Query28.8616
NC_002951:1474465Staphylococcus aureus subsp. aureus COL, complete genomeSubject ←→ Query29.1376
NC_017341:1976000Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Subject ←→ Query29.1442
NC_002952:1497785Staphylococcus aureus subsp. aureus MRSA252, complete genomeSubject ←→ Query29.2682
NC_002745:1432585Staphylococcus aureus subsp. aureus N315, complete genomeSubject ←→ Query29.4273
NC_009782:1510396Staphylococcus aureus subsp. aureus Mu3, complete genomeSubject ←→ Query29.4968
NC_014554:3164599Lactobacillus plantarum subsp. plantarum ST-III chromosome,Subject ←→ Query29.8294
NC_008525:108687*Pediococcus pentosaceus ATCC 25745, complete genomeSubject ←→ Query30.0765
NC_014922:825396*Haemophilus influenzae F3047 chromosome, complete genomeSubject ←→ Query30.1445
NC_017338:2296906*Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeSubject ←→ Query30.1945
NC_017351:2335753*Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeSubject ←→ Query30.9639
NC_013450:2306431*Staphylococcus aureus subsp. aureus ED98, complete genomeSubject ←→ Query30.9743
NC_020995:1205524Enterococcus casseliflavus EC20, complete genomeSubject ←→ Query31.1041
NC_017316:1840462*Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query31.1734
NC_004603:1464000Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeSubject ←→ Query31.3716
NC_011660:2175537Listeria monocytogenes HCC23 chromosome, complete genomeSubject ←→ Query31.4081
NC_016809:1778000Haemophilus influenzae 10810, complete genomeSubject ←→ Query31.4851
NC_015559:1960129Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeSubject ←→ Query31.5844
NC_014734:849941*Paludibacter propionicigenes WB4 chromosome, complete genomeSubject ←→ Query32.206
NC_013520:91961*Veillonella parvula DSM 2008, complete genomeSubject ←→ Query32.6686
NC_009567:904922*Haemophilus influenzae PittGG chromosome, complete genomeSubject ←→ Query33.0055
NC_015460:1687684*Gallibacterium anatis UMN179 chromosome, complete genomeSubject ←→ Query33.257
NC_010519:1411347Haemophilus somnus 2336 chromosome, complete genomeSubject Query34.6329
NC_016808:1335087Pasteurella multocida 36950 chromosome, complete genomeSubject Query35.9035
NC_015277:2568781Sphingobacterium sp. 21 chromosome, complete genomeSubject Query41.0445