Pre_GI: OUP Neighbours

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Query: NC_013890:1175931 Dehalococcoides sp. GT chromosome, complete genome

D: 30.1344

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

Number of Neighbours: 105

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_008571:365047Gramella forsetii KT0803, complete genome75.8119 %Subject Query19.622
NC_008571:505776*Gramella forsetii KT0803, complete genome75.8027 %Subject ←→ Query20.4832
NC_008571:2229369Gramella forsetii KT0803, complete genome76.7279 %Subject ←→ Query21.8628
NC_015519:2045935*Tepidanaerobacter sp. Re1 chromosome, complete genome75.1409 %Subject ←→ Query22.793
NC_015672:699904Flexistipes sinusarabici DSM 4947 chromosome, complete genome76.0815 %Subject ←→ Query22.8964
NC_015519:2739347*Tepidanaerobacter sp. Re1 chromosome, complete genome75.3186 %Subject ←→ Query23.2551
NC_015914:5470926*Cyclobacterium marinum DSM 745 chromosome, complete genome75.864 %Subject ←→ Query24.2887
NC_015519:1113095*Tepidanaerobacter sp. Re1 chromosome, complete genome75.769 %Subject ←→ Query24.544
NC_013061:2775623Pedobacter heparinus DSM 2366, complete genome76.9516 %Subject ←→ Query24.6656
NC_015672:1921023*Flexistipes sinusarabici DSM 4947 chromosome, complete genome77.1048 %Subject ←→ Query24.7677
NC_013061:1052957*Pedobacter heparinus DSM 2366, complete genome76.5411 %Subject ←→ Query26.7637
NC_011898:2951670Clostridium cellulolyticum H10, complete genome75.2849 %Subject ←→ Query27.2009
NC_008346:983816*Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete77.068 %Subject ←→ Query27.3255
NC_011899:1926000Halothermothrix orenii H 168, complete genome75.1379 %Subject ←→ Query27.5353
NC_009012:2356500Clostridium thermocellum ATCC 27405, complete genome75.0153 %Subject ←→ Query27.9669
NC_015672:203139*Flexistipes sinusarabici DSM 4947 chromosome, complete genome77.0037 %Subject ←→ Query28.0642
NC_008346:1431051Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete78.0055 %Subject ←→ Query28.4024
NC_011898:1218500Clostridium cellulolyticum H10, complete genome75.864 %Subject ←→ Query28.5479
NC_015565:1647554*Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete75.2206 %Subject ←→ Query28.8303
NC_008346:331820*Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete77.8493 %Subject ←→ Query29.1554
NC_007356:202131Dehalococcoides sp. CBDB1, complete genome78.1771 %Subject ←→ Query29.2855
NC_008346:1117802Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete75.0368 %Subject ←→ Query29.306
NC_014376:916063Clostridium saccharolyticum WM1 chromosome, complete genome75.8058 %Subject ←→ Query29.3075
NC_014376:1217000Clostridium saccharolyticum WM1 chromosome, complete genome76.0478 %Subject ←→ Query29.7766
NC_007503:2338110*Carboxydothermus hydrogenoformans Z-2901, complete genome75.7506 %Subject ←→ Query29.7941
NC_015577:1170186Treponema azotonutricium ZAS-9 chromosome, complete genome75.3033 %Subject ←→ Query29.9884
NC_014152:554656Thermincola sp. JR, complete genome76.0478 %Subject ←→ Query30.0158
NC_014376:869749*Clostridium saccharolyticum WM1 chromosome, complete genome76.3603 %Subject ←→ Query30.1532
NC_014152:1*Thermincola sp. JR, complete genome76.5901 %Subject ←→ Query30.1822
NC_008346:2370254Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete75.3002 %Subject ←→ Query30.1892
NC_014376:1879000Clostridium saccharolyticum WM1 chromosome, complete genome76.6667 %Subject ←→ Query30.1958
NC_014152:2056991Thermincola sp. JR, complete genome76.0876 %Subject ←→ Query30.2408
NC_014152:191200*Thermincola sp. JR, complete genome75.5821 %Subject ←→ Query30.3776
NC_007356:1221500Dehalococcoides sp. CBDB1, complete genome79.1697 %Subject ←→ Query30.4081
NC_011830:720756Desulfitobacterium hafniense DCB-2, complete genome75.3707 %Subject ←→ Query30.4292
NC_011830:4473583Desulfitobacterium hafniense DCB-2, complete genome77.2518 %Subject ←→ Query30.4795
NC_014376:2766326Clostridium saccharolyticum WM1 chromosome, complete genome77.2917 %Subject ←→ Query30.6603
NC_014152:397177Thermincola sp. JR, complete genome77.1752 %Subject ←→ Query30.7016
NC_015565:348941Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete76.7555 %Subject ←→ Query30.845
NC_007907:1996194Desulfitobacterium hafniense Y51, complete genome75.2757 %Subject ←→ Query31.019
NC_015565:2827444*Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete76.9884 %Subject ←→ Query31.0811
NC_015589:2941953*Desulfotomaculum ruminis DSM 2154 chromosome, complete genome77.3897 %Subject ←→ Query31.1527
NC_013216:1219775*Desulfotomaculum acetoxidans DSM 771, complete genome76.6605 %Subject ←→ Query31.2226
NC_013216:4097056*Desulfotomaculum acetoxidans DSM 771, complete genome76.875 %Subject ←→ Query31.2926
NC_013890:103807Dehalococcoides sp. GT chromosome, complete genome76.7004 %Subject ←→ Query31.3189
NC_013216:3376186*Desulfotomaculum acetoxidans DSM 771, complete genome76.5472 %Subject ←→ Query31.3564
NC_013890:808791*Dehalococcoides sp. GT chromosome, complete genome79.6293 %Subject ←→ Query31.6938
NC_011830:3081726*Desulfitobacterium hafniense DCB-2, complete genome75.4718 %Subject ←→ Query31.7425
NC_011830:4399642Desulfitobacterium hafniense DCB-2, complete genome76.3021 %Subject ←→ Query31.7789
NC_015589:2209011Desulfotomaculum ruminis DSM 2154 chromosome, complete genome76.1458 %Subject ←→ Query31.9705
NC_008346:2523289Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete76.682 %Subject ←→ Query32.008
NC_007907:761486Desulfitobacterium hafniense Y51, complete genome75.4933 %Subject ←→ Query32.0392
NC_002936:285527Dehalococcoides ethenogenes 195, complete genome81.1244 %Subject ←→ Query32.2239
NC_012108:2220983*Desulfobacterium autotrophicum HRM2, complete genome77.4939 %Subject ←→ Query32.3332
NC_013552:1240073Dehalococcoides sp. VS, complete genome80.8517 %Subject ←→ Query32.397
NC_015732:3145634*Spirochaeta caldaria DSM 7334 chromosome, complete genome76.5993 %Subject ←→ Query32.5055
NC_014376:787460*Clostridium saccharolyticum WM1 chromosome, complete genome75.1501 %Subject ←→ Query32.5601
NC_013216:4404085*Desulfotomaculum acetoxidans DSM 771, complete genome75.4351 %Subject ←→ Query32.6511
NC_013552:68003Dehalococcoides sp. VS, complete genome78.8542 %Subject ←→ Query32.6586
NC_015732:3105649Spirochaeta caldaria DSM 7334 chromosome, complete genome75.2022 %Subject ←→ Query32.7882
NC_007907:4926548Desulfitobacterium hafniense Y51, complete genome76.9792 %Subject ←→ Query32.7918
NC_015672:788417*Flexistipes sinusarabici DSM 4947 chromosome, complete genome77.3131 %Subject ←→ Query32.9442
NC_015732:30472Spirochaeta caldaria DSM 7334 chromosome, complete genome76.3695 %Subject ←→ Query33.0306
NC_013216:3625830Desulfotomaculum acetoxidans DSM 771, complete genome75.769 %Subject ←→ Query33.4448
NC_002936:1395432*Dehalococcoides ethenogenes 195, complete genome75.5055 %Subject ←→ Query33.5152
NC_015589:3813415Desulfotomaculum ruminis DSM 2154 chromosome, complete genome75.2757 %Subject ←→ Query33.5634
NC_015589:712626*Desulfotomaculum ruminis DSM 2154 chromosome, complete genome77.3928 %Subject ←→ Query33.5777
NC_015589:1439794*Desulfotomaculum ruminis DSM 2154 chromosome, complete genome77.549 %Subject ←→ Query33.7336
NC_014152:2849991Thermincola sp. JR, complete genome76.8045 %Subject ←→ Query33.8238
NC_011899:86800*Halothermothrix orenii H 168, complete genome76.2714 %Subject ←→ Query34.1326
NC_011830:1037520Desulfitobacterium hafniense DCB-2, complete genome76.5257 %Subject ←→ Query34.1988
NC_015589:2049328Desulfotomaculum ruminis DSM 2154 chromosome, complete genome76.3419 %Subject ←→ Query34.2057
NC_015732:529201*Spirochaeta caldaria DSM 7334 chromosome, complete genome75.8395 %Subject ←→ Query34.248
NC_015589:1468774Desulfotomaculum ruminis DSM 2154 chromosome, complete genome76.4767 %Subject ←→ Query34.3226
NC_015565:2508345*Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete76.7862 %Subject ←→ Query34.3818
NC_015589:3241364*Desulfotomaculum ruminis DSM 2154 chromosome, complete genome77.6256 %Subject ←→ Query34.5218
NC_014152:421481Thermincola sp. JR, complete genome77.0895 %Subject ←→ Query34.6197
NC_007907:2306561*Desulfitobacterium hafniense Y51, complete genome75.6955 %Subject ←→ Query34.6809
NC_013552:1187299Dehalococcoides sp. VS, complete genome77.9963 %Subject ←→ Query34.7771
NC_007356:1165760*Dehalococcoides sp. CBDB1, complete genome82.8186 %Subject ←→ Query34.8333
NC_013216:956461Desulfotomaculum acetoxidans DSM 771, complete genome75.1838 %Subject ←→ Query34.925
NC_015565:287900Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete75.1716 %Subject ←→ Query35.3218
NC_002936:797110*Dehalococcoides ethenogenes 195, complete genome76.9455 %Subject ←→ Query35.3871
NC_011830:4722607Desulfitobacterium hafniense DCB-2, complete genome75.1562 %Subject ←→ Query35.7585
NC_007356:51080*Dehalococcoides sp. CBDB1, complete genome78.8388 %Subject ←→ Query35.8422
NC_013216:1442044Desulfotomaculum acetoxidans DSM 771, complete genome76.9455 %Subject ←→ Query35.9786
NC_015672:2236000*Flexistipes sinusarabici DSM 4947 chromosome, complete genome76.3388 %Subject ←→ Query36.0612
NC_007907:4956500Desulfitobacterium hafniense Y51, complete genome77.402 %Subject ←→ Query36.3707
NC_013890:1142500Dehalococcoides sp. GT chromosome, complete genome75.4596 %Subject ←→ Query36.8223
NC_015589:814530Desulfotomaculum ruminis DSM 2154 chromosome, complete genome76.6513 %Subject ←→ Query37.0664
NC_015589:3711821Desulfotomaculum ruminis DSM 2154 chromosome, complete genome78.2169 %Subject ←→ Query37.1216
NC_002936:1319266*Dehalococcoides ethenogenes 195, complete genome75.7782 %Subject ←→ Query37.2693
NC_011830:4234392*Desulfitobacterium hafniense DCB-2, complete genome76.7739 %Subject ←→ Query37.6202
NC_009454:2502724Pelotomaculum thermopropionicum SI, complete genome77.3315 %Subject ←→ Query37.8556
NC_015589:2846000*Desulfotomaculum ruminis DSM 2154 chromosome, complete genome76.3082 %Subject ←→ Query37.9519
NC_007907:3722500Desulfitobacterium hafniense Y51, complete genome77.4969 %Subject ←→ Query38.1854
NC_015589:366296Desulfotomaculum ruminis DSM 2154 chromosome, complete genome75.1348 %Subject ←→ Query38.3052
NC_009454:2663539*Pelotomaculum thermopropionicum SI, complete genome76.296 %Subject ←→ Query39.9907
NC_015577:3113907Treponema azotonutricium ZAS-9 chromosome, complete genome76.1703 %Subject ←→ Query40.0715
NC_015589:1240197Desulfotomaculum ruminis DSM 2154 chromosome, complete genome75.432 %Subject Query40.192
NC_015578:2341026Treponema primitia ZAS-2 chromosome, complete genome76.6575 %Subject Query41.1981
NC_015578:247266*Treponema primitia ZAS-2 chromosome, complete genome75.625 %Subject Query42.47
NC_015578:3980496Treponema primitia ZAS-2 chromosome, complete genome76.3266 %Subject Query43.2228
NC_015578:61820Treponema primitia ZAS-2 chromosome, complete genome75.7445 %Subject Query43.4116
NC_015578:423000Treponema primitia ZAS-2 chromosome, complete genome75.3125 %Subject Query43.9608