Pre_GI: OUP Neighbours

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Query: NC_013768:418000 Listeria monocytogenes 08-5923, complete genome

D: 28.129

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".

Number of Neighbours: 50

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Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
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Host Information, e.g. soil, Thermo, Russia

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_016928:16869*Staphylococcus aureus subsp. aureus M013 chromosome, complete75.5024 %Subject ←→ Query19.6489
NC_002973:1846000*Listeria monocytogenes str. 4b F2365, complete genome80.6679 %Subject ←→ Query20.0663
NC_017338:14886*Staphylococcus aureus subsp. aureus JKD6159 chromosome, complete75.5147 %Subject ←→ Query20.087
NC_018704:2149229*Amphibacillus xylanus NBRC 15112, complete genome76.2286 %Subject ←→ Query21.0816
NC_013766:757987Listeria monocytogenes 08-5578 chromosome, complete genome84.5588 %Subject ←→ Query21.6318
NC_016052:842762Tetragenococcus halophilus NBRC 12172, complete genome81.0846 %Subject ←→ Query21.9417
NC_013766:1202713Listeria monocytogenes 08-5578 chromosome, complete genome81.7984 %Subject ←→ Query21.9875
NC_013766:906550Listeria monocytogenes 08-5578 chromosome, complete genome81.8107 %Subject ←→ Query22.0057
NC_011660:2924397Listeria monocytogenes HCC23 chromosome, complete genome80.3952 %Subject ←→ Query22.0817
NC_003210:721824Listeria monocytogenes EGD-e, complete genome85.1532 %Subject ←→ Query22.1346
NC_013768:1983711Listeria monocytogenes 08-5923, complete genome86.9179 %Subject ←→ Query22.2499
NC_012488:453431Listeria monocytogenes Clip81459, complete genome82.6195 %Subject ←→ Query22.4617
NC_011660:724711*Listeria monocytogenes HCC23 chromosome, complete genome86.1826 %Subject ←→ Query22.6167
NC_002973:730942Listeria monocytogenes str. 4b F2365, complete genome84.4485 %Subject ←→ Query22.6302
NC_017316:2466244*Enterococcus faecalis OG1RF chromosome, complete genome80.0123 %Subject ←→ Query22.7274
NC_010519:445936Haemophilus somnus 2336 chromosome, complete genome76.4737 %Subject ←→ Query23.2855
NC_013766:679906Listeria monocytogenes 08-5578 chromosome, complete genome83.0024 %Subject ←→ Query23.3402
NC_011660:1889504Listeria monocytogenes HCC23 chromosome, complete genome82.8983 %Subject ←→ Query23.6169
NC_012488:1159463Listeria monocytogenes Clip81459, complete genome81.9945 %Subject ←→ Query23.6635
NC_013768:721897Listeria monocytogenes 08-5923, complete genome85.2083 %Subject ←→ Query23.7536
NC_017316:2710021*Enterococcus faecalis OG1RF chromosome, complete genome78.4406 %Subject ←→ Query23.7547
NC_010519:1802294*Haemophilus somnus 2336 chromosome, complete genome76.7433 %Subject ←→ Query24.1488
NC_011660:2756860Listeria monocytogenes HCC23 chromosome, complete genome80.1991 %Subject ←→ Query24.8401
NC_017316:2637707Enterococcus faecalis OG1RF chromosome, complete genome79.4363 %Subject ←→ Query24.8589
NC_010519:796229Haemophilus somnus 2336 chromosome, complete genome77.8983 %Subject ←→ Query25.037
NC_010519:71365Haemophilus somnus 2336 chromosome, complete genome77.8309 %Subject ←→ Query26.3581
NC_010519:1165418Haemophilus somnus 2336 chromosome, complete genome77.8217 %Subject ←→ Query26.5151
NC_015277:4269399Sphingobacterium sp. 21 chromosome, complete genome78.8419 %Subject ←→ Query26.7631
NC_011660:366000Listeria monocytogenes HCC23 chromosome, complete genome82.1599 %Subject ←→ Query26.8414
NC_010519:416658*Haemophilus somnus 2336 chromosome, complete genome79.5404 %Subject ←→ Query27.2413
NC_012488:732233Listeria monocytogenes Clip81459, complete genome82.7206 %Subject ←→ Query27.4501
NC_017316:2581781*Enterococcus faecalis OG1RF chromosome, complete genome78.2935 %Subject ←→ Query27.6154
NC_013766:417991Listeria monocytogenes 08-5578 chromosome, complete genome99.9142 %Subject ←→ Query28.129
NC_004668:3118500Enterococcus faecalis V583, complete genome78.0178 %Subject ←→ Query28.4525
NC_009641:1979053Staphylococcus aureus subsp. aureus str. Newman chromosome,75.3768 %Subject ←→ Query28.638
NC_016052:1818659Tetragenococcus halophilus NBRC 12172, complete genome79.6661 %Subject ←→ Query28.6557
NC_017138:980696*Bacillus megaterium WSH-002 chromosome, complete genome76.0202 %Subject ←→ Query28.7972
NC_017341:1976000Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,75.8517 %Subject ←→ Query29.1442
NC_002952:1497785Staphylococcus aureus subsp. aureus MRSA252, complete genome75.1838 %Subject ←→ Query29.2682
NC_014554:3164599Lactobacillus plantarum subsp. plantarum ST-III chromosome,75.2941 %Subject ←→ Query29.8294
NC_008525:108687*Pediococcus pentosaceus ATCC 25745, complete genome75.386 %Subject ←→ Query30.0765
NC_014922:825396*Haemophilus influenzae F3047 chromosome, complete genome78.6397 %Subject ←→ Query30.1445
NC_020995:1205524Enterococcus casseliflavus EC20, complete genome78.5478 %Subject ←→ Query31.1041
NC_017316:1840462*Enterococcus faecalis OG1RF chromosome, complete genome79.617 %Subject ←→ Query31.1734
NC_011660:2175537Listeria monocytogenes HCC23 chromosome, complete genome85.242 %Subject ←→ Query31.4081
NC_016809:1778000Haemophilus influenzae 10810, complete genome79.9203 %Subject ←→ Query31.4851
NC_014734:849941*Paludibacter propionicigenes WB4 chromosome, complete genome77.1722 %Subject ←→ Query32.206
NC_009567:904922*Haemophilus influenzae PittGG chromosome, complete genome79.7273 %Subject ←→ Query33.0055
NC_015460:1687684*Gallibacterium anatis UMN179 chromosome, complete genome75.7445 %Subject ←→ Query33.257
NC_016808:1335087Pasteurella multocida 36950 chromosome, complete genome77.261 %Subject ←→ Query35.9035