Pre_GI: OUP Neighbours

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Query: NC_013768:29324 Listeria monocytogenes 08-5923, complete genome

D: 21.9388

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".

Number of Neighbours: 20




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013766:29324Listeria monocytogenes 08-5578 chromosome, complete genome100 %Subject ←→ Query21.9388
NC_012488:2719955Listeria monocytogenes Clip81459, complete genome85.6955 %Subject ←→ Query22.5499
NC_013768:171889Listeria monocytogenes 08-5923, complete genome85.2206 %Subject ←→ Query23.6989
NC_013766:171889Listeria monocytogenes 08-5578 chromosome, complete genome85.2574 %Subject ←→ Query23.6989
NC_011660:2839201Listeria monocytogenes HCC23 chromosome, complete genome85.9957 %Subject ←→ Query25.6131
NC_007520:2391675Thiomicrospira crunogena XCL-2, complete genome75.0398 %Subject ←→ Query26.1369
NC_008497:32160Lactobacillus brevis ATCC 367, complete genome75.2604 %Subject ←→ Query26.6719
NC_020300:131782*Bartonella australis Aust/NH1, complete genome76.5839 %Subject ←→ Query28.0004
NC_020300:675551*Bartonella australis Aust/NH1, complete genome77.8156 %Subject ←→ Query28.5931
NC_013721:1581370*Gardnerella vaginalis 409-05, complete genome76.299 %Subject ←→ Query29.3242
NC_014554:337268Lactobacillus plantarum subsp. plantarum ST-III chromosome,78.4743 %Subject ←→ Query29.7285
NC_014644:1532500*Gardnerella vaginalis ATCC 14019 chromosome, complete genome75.0429 %Subject ←→ Query30.4718
NC_007520:1940120*Thiomicrospira crunogena XCL-2, complete genome75.8241 %Subject ←→ Query31.019
NC_014554:1019730Lactobacillus plantarum subsp. plantarum ST-III chromosome,77.8002 %Subject Query32.3869
NC_015276:2171355*Marinomonas mediterranea MMB-1 chromosome, complete genome75.3033 %Subject Query32.7927
NC_014965:1428902*Vibrio vulnificus MO6-24/O chromosome I, complete sequence75.5637 %Subject Query32.8611
NC_018697:2055725*Cycloclasticus sp. P1 chromosome, complete genome77.5061 %Subject Query33.7578
NC_012580:353273Vibrio cholerae M66-2 chromosome II, complete sequence75.1562 %Subject Query34.0437
NC_015572:1421782Methylomonas methanica MC09 chromosome, complete genome76.1489 %Subject Query34.0502
NC_012997:4906423Teredinibacter turnerae T7901, complete genome76.7831 %Subject Query34.8325