Pre_GI: OUP Neighbours

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Query: NC_013766:1202713 Listeria monocytogenes 08-5578 chromosome, complete genome

D: 21.9875

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".

Number of Neighbours: 38




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_002973:1846000*Listeria monocytogenes str. 4b F2365, complete genome82.0864 %Subject ←→ Query20.0663
NC_018704:2149229*Amphibacillus xylanus NBRC 15112, complete genome75.9926 %Subject ←→ Query21.0816
NC_013766:757987Listeria monocytogenes 08-5578 chromosome, complete genome79.9724 %Subject ←→ Query21.6318
NC_016052:842762Tetragenococcus halophilus NBRC 12172, complete genome78.0607 %Subject ←→ Query21.9417
NC_013766:906550Listeria monocytogenes 08-5578 chromosome, complete genome82.3897 %Subject ←→ Query22.0057
NC_011660:2924397Listeria monocytogenes HCC23 chromosome, complete genome78.3088 %Subject ←→ Query22.0817
NC_003210:721824Listeria monocytogenes EGD-e, complete genome80.8425 %Subject ←→ Query22.1346
NC_013768:1983711Listeria monocytogenes 08-5923, complete genome85.3768 %Subject ←→ Query22.2499
NC_012488:453431Listeria monocytogenes Clip81459, complete genome77.9596 %Subject ←→ Query22.4617
NC_011660:724711*Listeria monocytogenes HCC23 chromosome, complete genome84.0594 %Subject ←→ Query22.6167
NC_002973:730942Listeria monocytogenes str. 4b F2365, complete genome81.4185 %Subject ←→ Query22.6302
NC_017316:2466244*Enterococcus faecalis OG1RF chromosome, complete genome78.3793 %Subject ←→ Query22.7274
NC_010519:445936Haemophilus somnus 2336 chromosome, complete genome76.826 %Subject ←→ Query23.2855
NC_013766:679906Listeria monocytogenes 08-5578 chromosome, complete genome82.019 %Subject ←→ Query23.3402
NC_011660:1889504Listeria monocytogenes HCC23 chromosome, complete genome77.2518 %Subject ←→ Query23.6169
NC_012488:1159463Listeria monocytogenes Clip81459, complete genome93.3885 %Subject ←→ Query23.6635
NC_013768:721897Listeria monocytogenes 08-5923, complete genome80.9344 %Subject ←→ Query23.7536
NC_017316:2710021*Enterococcus faecalis OG1RF chromosome, complete genome79.6814 %Subject ←→ Query23.7547
NC_011660:2756860Listeria monocytogenes HCC23 chromosome, complete genome78.0208 %Subject ←→ Query24.8401
NC_010519:796229Haemophilus somnus 2336 chromosome, complete genome76.5533 %Subject ←→ Query25.037
NC_010519:71365Haemophilus somnus 2336 chromosome, complete genome77.2947 %Subject ←→ Query26.3581
NC_010519:1165418Haemophilus somnus 2336 chromosome, complete genome76.7586 %Subject ←→ Query26.5151
NC_011660:366000Listeria monocytogenes HCC23 chromosome, complete genome81.3542 %Subject ←→ Query26.8414
NC_010519:416658*Haemophilus somnus 2336 chromosome, complete genome78.7653 %Subject ←→ Query27.2413
NC_012488:732233Listeria monocytogenes Clip81459, complete genome79.4393 %Subject ←→ Query27.4501
NC_017316:2581781*Enterococcus faecalis OG1RF chromosome, complete genome80.1777 %Subject ←→ Query27.6154
NC_013766:417991Listeria monocytogenes 08-5578 chromosome, complete genome81.7555 %Subject ←→ Query28.129
NC_013768:418000Listeria monocytogenes 08-5923, complete genome81.7984 %Subject ←→ Query28.129
NC_016052:1818659Tetragenococcus halophilus NBRC 12172, complete genome78.4314 %Subject ←→ Query28.6557
NC_017138:980696*Bacillus megaterium WSH-002 chromosome, complete genome77.9902 %Subject ←→ Query28.7972
NC_020995:1205524Enterococcus casseliflavus EC20, complete genome77.9565 %Subject ←→ Query31.1041
NC_017316:1840462*Enterococcus faecalis OG1RF chromosome, complete genome78.652 %Subject ←→ Query31.1734
NC_004603:1464000Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete75.6434 %Subject ←→ Query31.3716
NC_011660:2175537Listeria monocytogenes HCC23 chromosome, complete genome81.152 %Subject ←→ Query31.4081
NC_016809:1778000Haemophilus influenzae 10810, complete genome75.095 %Subject ←→ Query31.4851
NC_009567:904922*Haemophilus influenzae PittGG chromosome, complete genome75.6066 %Subject Query33.0055
NC_010519:1411347Haemophilus somnus 2336 chromosome, complete genome76.4583 %Subject Query34.6329
NC_016808:1335087Pasteurella multocida 36950 chromosome, complete genome77.7911 %Subject Query35.9035