Pre_GI: OUP Neighbours

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Query: NC_013716:4728500 Citrobacter rodentium ICC168, complete genome

D: 35.4511

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.

Number of Neighbours: 3




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_003198:3586000*Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.5852 %Subject ←→ Query35.6335
NC_010473:4256000*Escherichia coli str. K-12 substr. DH10B, complete genome75.2359 %Subject ←→ Query36.1868
NC_010468:4455201*Escherichia coli ATCC 8739, complete genome75.723 %Subject ←→ Query38.0958