Pre_GI: OUP Neighbours

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Query: NC_013716:1756545 Citrobacter rodentium ICC168, complete genome

D: 33.4286

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.

Number of Neighbours: 100




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence75.1164 %Subject ←→ Query28.1767
NC_012912:4737703Dickeya zeae Ech1591, complete genome75.8241 %Subject ←→ Query29.5142
NC_012880:2480000Dickeya dadantii Ech703, complete genome75.3278 %Subject ←→ Query30.1678
NC_015968:204969*Enterobacter asburiae LF7a chromosome, complete genome77.9442 %Subject ←→ Query30.2205
NC_014562:1935088Pantoea vagans C9-1 chromosome, complete genome75.1654 %Subject ←→ Query30.3988
NC_012880:913698Dickeya dadantii Ech703, complete genome78.848 %Subject ←→ Query30.49
NC_015663:1934863Enterobacter aerogenes KCTC 2190 chromosome, complete genome77.981 %Subject ←→ Query30.6937
NC_015968:4389871Enterobacter asburiae LF7a chromosome, complete genome79.2249 %Subject ←→ Query30.7332
NC_004631:2755306Salmonella enterica subsp. enterica serovar Typhi Ty2, complete81.296 %Subject ←→ Query30.7575
NC_013282:646569Cronobacter turicensis, complete genome79.1942 %Subject ←→ Query30.8062
NC_003198:2769449Salmonella enterica subsp. enterica serovar Typhi str. CT18,81.296 %Subject ←→ Query31.0494
NC_012912:2800884*Dickeya zeae Ech1591, complete genome76.829 %Subject ←→ Query31.095
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence75.337 %Subject ←→ Query31.1132
NC_015663:1902344*Enterobacter aerogenes KCTC 2190 chromosome, complete genome77.5827 %Subject ←→ Query31.1284
NC_006511:3759550Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.4277 %Subject ←→ Query31.1345
NC_012917:4328463Pectobacterium carotovorum subsp. carotovorum PC1, complete genome78.7684 %Subject ←→ Query31.405
NC_011149:3895921Salmonella enterica subsp. enterica serovar Agona str. SL483,76.2653 %Subject ←→ Query31.5601
NC_010067:171053Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.739 %Subject ←→ Query31.5722
NC_015663:4447984Enterobacter aerogenes KCTC 2190 chromosome, complete genome76.1489 %Subject ←→ Query31.6444
NC_004631:283289*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete76.9148 %Subject ←→ Query31.6756
NC_013282:3719500*Cronobacter turicensis, complete genome79.0717 %Subject ←→ Query31.6817
NC_010102:2881714Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,81.9853 %Subject ←→ Query32.0373
NC_004631:3841975Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.7966 %Subject ←→ Query32.0647
NC_010102:3919999Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.9712 %Subject ←→ Query32.0708
NC_003197:3971905Salmonella typhimurium LT2, complete genome75.8456 %Subject ←→ Query32.0829
NC_014500:3519722Dickeya dadantii 3937 chromosome, complete genome77.3499 %Subject ←→ Query32.164
NC_012912:1229333Dickeya zeae Ech1591, complete genome78.4007 %Subject ←→ Query32.2592
NC_011083:3985618Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.9957 %Subject ←→ Query32.4599
NC_003198:3855157Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.1501 %Subject ←→ Query32.5632
NC_012917:4646491Pectobacterium carotovorum subsp. carotovorum PC1, complete genome77.7972 %Subject ←→ Query32.6958
NC_013508:1262333Edwardsiella tarda EIB202, complete genome75.5637 %Subject ←→ Query32.8692
NC_012880:3645304Dickeya dadantii Ech703, complete genome75.8119 %Subject ←→ Query33.3293
NC_013282:116649*Cronobacter turicensis, complete genome76.0723 %Subject ←→ Query33.8673
NC_010102:283364*Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,78.1893 %Subject ←→ Query33.8947
NC_012912:777592*Dickeya zeae Ech1591, complete genome79.2616 %Subject ←→ Query33.9737
NC_014562:1698253Pantoea vagans C9-1 chromosome, complete genome76.5012 %Subject ←→ Query33.9839
NC_014562:1883517*Pantoea vagans C9-1 chromosome, complete genome76.204 %Subject ←→ Query34.2182
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome75.0705 %Subject ←→ Query34.9445
NC_010694:3055403Erwinia tasmaniensis, complete genome75.723 %Subject ←→ Query35.0644
NC_012779:1629731Edwardsiella ictaluri 93-146, complete genome75.1317 %Subject ←→ Query35.0944
NC_009778:1902995Enterobacter sakazakii ATCC BAA-894, complete genome77.6961 %Subject ←→ Query35.1593
NC_014562:1402863Pantoea vagans C9-1 chromosome, complete genome76.8229 %Subject ←→ Query35.29
NC_003198:3824187Salmonella enterica subsp. enterica serovar Typhi str. CT18,77.1078 %Subject ←→ Query35.4207
NC_010694:614985Erwinia tasmaniensis, complete genome79.6293 %Subject ←→ Query35.5876
NC_010067:3753971Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete76.3603 %Subject ←→ Query35.7065
NC_006905:3942753Salmonella enterica subsp. enterica serovar Choleraesuis str79.2433 %Subject ←→ Query35.749
NC_010067:632683Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.8707 %Subject ←→ Query35.8098
NC_012779:2424967*Edwardsiella ictaluri 93-146, complete genome77.8983 %Subject ←→ Query35.992
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.9436 %Subject ←→ Query36.1113
NC_004631:3809678Salmonella enterica subsp. enterica serovar Typhi Ty2, complete76.9179 %Subject ←→ Query36.1376
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC77.6716 %Subject ←→ Query36.3874
NC_003197:4005857Salmonella typhimurium LT2, complete genome77.0588 %Subject ←→ Query36.3904
NC_011080:2789744*Salmonella enterica subsp. enterica serovar Newport str. SL254,76.7433 %Subject ←→ Query36.512
NC_011080:3976441Salmonella enterica subsp. enterica serovar Newport str. SL254,77.2917 %Subject ←→ Query36.5166
NC_012880:2778795Dickeya dadantii Ech703, complete genome80.818 %Subject ←→ Query36.5333
NC_011149:361765Salmonella enterica subsp. enterica serovar Agona str. SL483,77.8431 %Subject ←→ Query36.5643
NC_004547:138500Erwinia carotovora subsp. atroseptica SCRI1043, complete genome77.6134 %Subject ←→ Query36.6454
NC_009648:3720000*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.7862 %Subject ←→ Query36.7036
NC_009778:3454790Enterobacter sakazakii ATCC BAA-894, complete genome78.6979 %Subject ←→ Query36.7583
NC_011080:383441Salmonella enterica subsp. enterica serovar Newport str. SL254,77.6593 %Subject ←→ Query37.0114
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome75.6556 %Subject ←→ Query37.0151
NC_008150:1420825*Yersinia pestis Antiqua, complete genome80.2267 %Subject ←→ Query37.0184
NC_005810:1794490*Yersinia pestis biovar Microtus str. 91001, complete genome80.2757 %Subject ←→ Query37.035
NC_007712:433500Sodalis glossinidius str. 'morsitans', complete genome75.1471 %Subject ←→ Query37.0845
NC_010102:3955479Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,77.0129 %Subject ←→ Query37.2943
NC_003143:2137945*Yersinia pestis CO92, complete genome80.0797 %Subject ←→ Query37.3318
NC_006511:3794017Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.2439 %Subject ←→ Query37.3602
NC_010694:2189652*Erwinia tasmaniensis, complete genome77.1875 %Subject ←→ Query37.4179
NC_014500:2934232*Dickeya dadantii 3937 chromosome, complete genome79.4853 %Subject ←→ Query37.5286
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str75.2237 %Subject ←→ Query37.6094
NC_012779:3016327Edwardsiella ictaluri 93-146, complete genome75.5974 %Subject ←→ Query37.6194
NC_011083:4020000Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,77.4112 %Subject ←→ Query37.6885
NC_012912:647369Dickeya zeae Ech1591, complete genome79.2096 %Subject ←→ Query37.7391
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome78.2904 %Subject ←→ Query37.8586
NC_012779:261438*Edwardsiella ictaluri 93-146, complete genome75.2083 %Subject ←→ Query37.9045
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,79.1851 %Subject ←→ Query37.9381
NC_014500:1646854*Dickeya dadantii 3937 chromosome, complete genome80.7169 %Subject ←→ Query37.9513
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,75.7935 %Subject ←→ Query38.0253
NC_011149:3930358Salmonella enterica subsp. enterica serovar Agona str. SL483,76.8505 %Subject ←→ Query38.0507
NC_007645:6991163Hahella chejuensis KCTC 2396, complete genome75.8824 %Subject ←→ Query38.1445
NC_003198:2703013*Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.9822 %Subject ←→ Query38.1505
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome77.9596 %Subject ←→ Query38.2235
NC_006511:3364448*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.8885 %Subject ←→ Query38.4606
NC_013282:1256769Cronobacter turicensis, complete genome80.4228 %Subject ←→ Query38.8742
NC_011080:3941909Salmonella enterica subsp. enterica serovar Newport str. SL254,75.723 %Subject ←→ Query39.4334
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome75.8395 %Subject ←→ Query39.7546
NC_006905:2805877*Salmonella enterica subsp. enterica serovar Choleraesuis str78.1863 %Subject ←→ Query39.786
NC_015663:770485*Enterobacter aerogenes KCTC 2190 chromosome, complete genome79.1115 %Subject ←→ Query39.8332
NC_004547:667988*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.3799 %Subject ←→ Query39.9614
NC_013282:3216226*Cronobacter turicensis, complete genome80.3493 %Subject ←→ Query41.2788
NC_012779:1449500*Edwardsiella ictaluri 93-146, complete genome75.1593 %Subject ←→ Query41.6091
NC_013508:876431*Edwardsiella tarda EIB202, complete genome77.2059 %Subject ←→ Query41.7282
NC_013283:113660Cronobacter turicensis plasmid pCTU1, complete sequence76.492 %Subject ←→ Query42.151
NC_013508:2130681*Edwardsiella tarda EIB202, complete genome75.5729 %Subject ←→ Query42.2435
NC_009648:293052*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome79.7212 %Subject Query43.5401
NC_014500:3175283Dickeya dadantii 3937 chromosome, complete genome76.7616 %Subject Query44.4588
NC_013508:2356865*Edwardsiella tarda EIB202, complete genome76.538 %Subject Query44.5077
NC_012779:2586175Edwardsiella ictaluri 93-146, complete genome76.8566 %Subject Query45.323
NC_009778:1141716Enterobacter sakazakii ATCC BAA-894, complete genome76.6513 %Subject Query48.5924
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.5165 %Subject Query49.6231