Pre_GI: OUP Neighbours

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Query: NC_013364:863209 Escherichia coli O111:H- str. 11128, complete genome

D: 37.1558

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 210




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015737:664999*Clostridium sp. SY8519, complete genome75.4228 %Subject ←→ Query28.8363
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome75.3094 %Subject ←→ Query29.5112
NC_011745:1055354*Escherichia coli ED1a chromosome, complete genome85.2175 %Subject ←→ Query30.2164
NC_016863:2721826Salmonella enterica subsp. enterica serovar Typhimurium str. UK-177.9013 %Subject ←→ Query30.7584
NC_013941:5317424Escherichia coli O55:H7 str. CB9615 chromosome, complete genome86.682 %Subject ←→ Query30.8609
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence75.3768 %Subject ←→ Query31.1132
NC_011745:2025725Escherichia coli ED1a chromosome, complete genome87.4142 %Subject ←→ Query31.1649
NC_016612:4823529Klebsiella oxytoca KCTC 1686 chromosome, complete genome77.5797 %Subject ←→ Query31.3367
NC_016857:2719779Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7477.3376 %Subject ←→ Query31.43
NC_016810:2719779Salmonella enterica subsp. enterica serovar Typhimurium str77.5919 %Subject ←→ Query31.43
NC_013971:666730Erwinia amylovora ATCC 49946 chromosome, complete genome75.867 %Subject ←→ Query31.4537
NC_016856:2773995Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S77.3346 %Subject ←→ Query31.5078
NC_016818:1963875Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, complete76.3726 %Subject ←→ Query31.9066
NC_008563:3119284Escherichia coli APEC O1, complete genome79.9449 %Subject ←→ Query31.9127
NC_011742:4962008Escherichia coli S88 chromosome, complete genome86.2623 %Subject ←→ Query32.4611
NC_015737:2050219Clostridium sp. SY8519, complete genome75.527 %Subject ←→ Query32.545
NC_013353:2134556*Escherichia coli O103:H2 str. 12009, complete genome83.6826 %Subject ←→ Query32.8216
NC_013892:274297Xenorhabdus bovienii SS-2004 chromosome, complete genome77.9412 %Subject ←→ Query32.8965
NC_013941:1014386Escherichia coli O55:H7 str. CB9615 chromosome, complete genome82.6226 %Subject ←→ Query33.1965
NC_016861:22256Salmonella enterica subsp. enterica serovar Typhimurium str75.8609 %Subject ←→ Query33.2928
NC_011283:942594Klebsiella pneumoniae 342 chromosome, complete genome75.1961 %Subject ←→ Query33.3475
NC_007384:1763375Shigella sonnei Ss046, complete genome81.204 %Subject ←→ Query33.4012
NC_013592:2160000Dickeya dadantii Ech586, complete genome75.4902 %Subject ←→ Query33.4874
NC_016860:2323017*Salmonella enterica subsp. enterica serovar Typhimurium str77.1783 %Subject ←→ Query33.5197
NC_016857:2325190*Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7477.1201 %Subject ←→ Query33.5449
NC_016810:2325190*Salmonella enterica subsp. enterica serovar Typhimurium str77.1201 %Subject ←→ Query33.5449
NC_016856:2379027*Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S77.0312 %Subject ←→ Query33.6556
NC_011353:921500Escherichia coli O157:H7 str. EC4115 chromosome, complete genome80.5515 %Subject ←→ Query34.5194
CU928160:256932Escherichia coli IAI1 chromosome, complete genome80.9069 %Subject ←→ Query34.5956
NC_011741:256932Escherichia coli IAI1 chromosome, complete genome80.9069 %Subject ←→ Query34.5956
NC_013892:753307Xenorhabdus bovienii SS-2004 chromosome, complete genome75.9865 %Subject ←→ Query34.8067
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome78.0974 %Subject ←→ Query34.8158
NC_013364:2522888Escherichia coli O111:H- str. 11128, complete genome88.1311 %Subject ←→ Query34.9313
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome75.0184 %Subject ←→ Query34.9445
NC_017046:2324554*Salmonella enterica subsp. enterica serovar Typhimurium str. 79877.117 %Subject ←→ Query35.0182
NC_014618:4312295*Enterobacter cloacae SCF1 chromosome, complete genome75.1164 %Subject ←→ Query35.071
NC_013008:918215Escherichia coli O157:H7 str. TW14359 chromosome, complete genome86.7953 %Subject ←→ Query35.1897
NC_011353:2892265Escherichia coli O157:H7 str. EC4115 chromosome, complete genome86.97 %Subject ←→ Query35.2611
NC_012125:1517925*Salmonella enterica subsp. enterica serovar Paratyphi C strain75.8793 %Subject ←→ Query35.3356
NC_014029:331919Yersinia pestis Z176003 chromosome, complete genome77.1722 %Subject ←→ Query35.6572
NC_016831:1865681Salmonella enterica subsp. enterica serovar Gallinarum/pullorum80.8241 %Subject ←→ Query35.6576
NC_016831:687549*Salmonella enterica subsp. enterica serovar Gallinarum/pullorum75.8793 %Subject ←→ Query35.667
NC_011601:756885Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome85.3339 %Subject ←→ Query35.8585
NC_009832:1946401Serratia proteamaculans 568, complete genome79.4179 %Subject ←→ Query35.908
NC_013364:3312379Escherichia coli O111:H- str. 11128, complete genome84.0319 %Subject ←→ Query36.0044
NC_011094:4442478Salmonella enterica subsp. enterica serovar Schwarzengrund str77.8768 %Subject ←→ Query36.096
NC_013941:2425233Escherichia coli O55:H7 str. CB9615 chromosome, complete genome87.8738 %Subject ←→ Query36.1047
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete76.106 %Subject ←→ Query36.1113
NC_016832:687000*Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,76.6176 %Subject ←→ Query36.1337
NC_011601:1077548Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome83.0331 %Subject ←→ Query36.1989
NC_013961:3083816Erwinia amylovora, complete genome75.6373 %Subject ←→ Query36.2172
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence80.0674 %Subject ←→ Query36.3239
NC_009801:3374501*Escherichia coli E24377A, complete genome82.163 %Subject ←→ Query36.3653
NC_016845:3238507*Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,77.0649 %Subject ←→ Query36.3698
NC_004431:1352906Escherichia coli CFT073, complete genome88.7163 %Subject ←→ Query36.4239
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome88.3824 %Subject ←→ Query36.4725
NC_016612:5600177Klebsiella oxytoca KCTC 1686 chromosome, complete genome78.2629 %Subject ←→ Query36.4903
NC_012731:3193880*Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome76.7678 %Subject ←→ Query36.6801
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome89.28 %Subject ←→ Query36.7127
NC_013353:1472506Escherichia coli O103:H2 str. 12009, complete genome89.28 %Subject ←→ Query36.7127
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome86.5839 %Subject ←→ Query36.813
NC_011094:638552Salmonella enterica subsp. enterica serovar Schwarzengrund str79.3413 %Subject ←→ Query36.8525
NC_010660:33109Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence75.7261 %Subject ←→ Query36.8677
NC_009378:106193Yersinia pestis Pestoides F plasmid MT, complete sequence78.7132 %Subject ←→ Query36.8715
NC_011353:1195179*Escherichia coli O157:H7 str. EC4115 chromosome, complete genome86.9363 %Subject ←→ Query36.9832
NC_013941:1963523Escherichia coli O55:H7 str. CB9615 chromosome, complete genome89.0839 %Subject ←→ Query36.9893
NC_016863:2324293*Salmonella enterica subsp. enterica serovar Typhimurium str. UK-176.2071 %Subject ←→ Query37.0731
NC_013008:2889743Escherichia coli O157:H7 str. TW14359 chromosome, complete genome86.5686 %Subject ←→ Query37.196
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome86.9179 %Subject ←→ Query37.275
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,75.1593 %Subject ←→ Query37.4165
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome81.0141 %Subject ←→ Query37.4593
NC_013892:1503162Xenorhabdus bovienii SS-2004 chromosome, complete genome75.242 %Subject ←→ Query37.6494
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome87.4755 %Subject ←→ Query37.6581
NC_013361:2169948Escherichia coli O26:H11 str. 11368 chromosome, complete genome86.8505 %Subject ←→ Query37.7614
NC_016822:1839739Shigella sonnei 53G, complete genome81.1305 %Subject ←→ Query37.9198
NC_007385:157516Shigella sonnei Ss046 plasmid pSS_046, complete sequence82.3284 %Subject ←→ Query38.0958
NC_013008:1761165Escherichia coli O157:H7 str. TW14359 chromosome, complete genome89.6507 %Subject ←→ Query38.2113
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome76.0601 %Subject ←→ Query38.2235
NC_013361:1896446Escherichia coli O26:H11 str. 11368 chromosome, complete genome91.0907 %Subject ←→ Query38.2296
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome91.0539 %Subject ←→ Query38.4667
NC_011353:1761977Escherichia coli O157:H7 str. EC4115 chromosome, complete genome90.4136 %Subject ←→ Query38.5032
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome82.8401 %Subject ←→ Query38.6045
NC_011205:329155Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185378.0729 %Subject ←→ Query38.7596
NC_011742:585908Escherichia coli S88 chromosome, complete genome89.5772 %Subject ←→ Query38.828
NC_011353:261220Escherichia coli O157:H7 str. EC4115 chromosome, complete genome79.2892 %Subject ←→ Query38.9884
NC_011750:2009889Escherichia coli IAI39 chromosome, complete genome77.5153 %Subject ←→ Query39.0625
NC_013008:261226Escherichia coli O157:H7 str. TW14359 chromosome, complete genome79.3015 %Subject ←→ Query39.1965
NC_013941:261094Escherichia coli O55:H7 str. CB9615 chromosome, complete genome79.4148 %Subject ←→ Query39.1987
NC_016822:267758Shigella sonnei 53G, complete genome81.7555 %Subject ←→ Query39.2695
NC_011274:1129686Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9180.9406 %Subject ←→ Query39.5488
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome75.8272 %Subject ←→ Query39.7546
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome78.7561 %Subject ←→ Query39.836
NC_013361:1593543Escherichia coli O26:H11 str. 11368 chromosome, complete genome89.1513 %Subject ←→ Query40.2481
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete79.4301 %Subject ←→ Query40.59
NC_013592:1424560Dickeya dadantii Ech586, complete genome75.2757 %Subject ←→ Query41.2418
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome76.6176 %Subject ←→ Query41.4806
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome75.2574 %Subject ←→ Query41.5453
NC_016845:1773416Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,78.9951 %Subject ←→ Query41.6817
NC_011283:2103500*Klebsiella pneumoniae 342 chromosome, complete genome75.4871 %Subject ←→ Query42.41
NC_012731:2302974Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome75.3278 %Subject ←→ Query43.1245
NC_016846:24500Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,77.3774 %Subject ←→ Query43.5812
NC_010660:175200*Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence81.3603 %Subject ←→ Query46.3542
NC_011283:1901229*Klebsiella pneumoniae 342 chromosome, complete genome75.723 %Subject Query49.5744
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.9332 %Subject Query49.6231
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.9669 %Subject Query50.7802