Pre_GI: OUP Neighbours

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Query: NC_013353:1472506 Escherichia coli O103:H2 str. 12009, complete genome

D: 36.7127

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 296




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence75.2237 %Subject ←→ Query28.1767
NC_016835:405482Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,75.723 %Subject ←→ Query28.7087
NC_015737:664999*Clostridium sp. SY8519, complete genome75.9712 %Subject ←→ Query28.8363
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome76.1673 %Subject ←→ Query29.1646
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome77.0221 %Subject ←→ Query29.5112
NC_014029:3958811Yersinia pestis Z176003 chromosome, complete genome76.0784 %Subject ←→ Query29.6054
NC_003143:4006884Yersinia pestis CO92, complete genome76.0968 %Subject ←→ Query29.6176
NC_017154:3898925Yersinia pestis D106004 chromosome, complete genome76.0784 %Subject ←→ Query29.6936
NC_008149:4053363Yersinia pestis Nepal516, complete genome76.3756 %Subject ←→ Query30.0006
NC_004088:266543Yersinia pestis KIM, complete genome76.3726 %Subject ←→ Query30.0081
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome75.8272 %Subject ←→ Query30.1556
NC_011745:1055354*Escherichia coli ED1a chromosome, complete genome87.0956 %Subject ←→ Query30.2164
NC_020260:1993344Cronobacter sakazakii Sp291, complete genome76.6268 %Subject ←→ Query30.2286
NC_014500:2525880Dickeya dadantii 3937 chromosome, complete genome75.9314 %Subject ←→ Query30.3147
NC_016863:2721826Salmonella enterica subsp. enterica serovar Typhimurium str. UK-178.413 %Subject ←→ Query30.7584
NC_013941:5317424Escherichia coli O55:H7 str. CB9615 chromosome, complete genome84.9081 %Subject ←→ Query30.8609
NC_015737:1385585Clostridium sp. SY8519, complete genome75.242 %Subject ←→ Query30.9582
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence78.4375 %Subject ←→ Query31.1132
NC_011745:2025725Escherichia coli ED1a chromosome, complete genome86.7862 %Subject ←→ Query31.1649
NC_016612:4823529Klebsiella oxytoca KCTC 1686 chromosome, complete genome78.9124 %Subject ←→ Query31.3367
NC_016810:2719779Salmonella enterica subsp. enterica serovar Typhimurium str78.1036 %Subject ←→ Query31.43
NC_016857:2719779Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7477.8676 %Subject ←→ Query31.43
NC_013971:666730Erwinia amylovora ATCC 49946 chromosome, complete genome78.1005 %Subject ←→ Query31.4537
NC_016856:2773995Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S77.7237 %Subject ←→ Query31.5078
NC_009832:358291Serratia proteamaculans 568, complete genome75.3891 %Subject ←→ Query31.5844
NC_016822:246715*Shigella sonnei 53G, complete genome77.356 %Subject ←→ Query31.6959
NC_016818:1963875Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, complete78.8205 %Subject ←→ Query31.9066
NC_008563:3119284Escherichia coli APEC O1, complete genome82.0006 %Subject ←→ Query31.9127
NC_011742:4962008Escherichia coli S88 chromosome, complete genome83.2751 %Subject ←→ Query32.4611
NC_013353:2134556*Escherichia coli O103:H2 str. 12009, complete genome82.8339 %Subject ←→ Query32.8216
NC_016845:2306744Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,75.8762 %Subject ←→ Query32.8773
NC_013892:274297Xenorhabdus bovienii SS-2004 chromosome, complete genome80.6036 %Subject ←→ Query32.8965
NC_016816:4129299Pantoea ananatis LMG 5342, complete genome77.5888 %Subject ←→ Query32.9219
NC_009708:372422Yersinia pseudotuberculosis IP 31758 chromosome, complete genome75.674 %Subject ←→ Query33.1886
NC_013941:1014386Escherichia coli O55:H7 str. CB9615 chromosome, complete genome81.9516 %Subject ←→ Query33.1965
NC_016861:22256Salmonella enterica subsp. enterica serovar Typhimurium str79.5221 %Subject ←→ Query33.2928
NC_011283:942594Klebsiella pneumoniae 342 chromosome, complete genome77.6317 %Subject ←→ Query33.3475
NC_007384:1763375Shigella sonnei Ss046, complete genome80.3676 %Subject ←→ Query33.4012
NC_013592:2160000Dickeya dadantii Ech586, complete genome76.4491 %Subject ←→ Query33.4874
NC_012912:2285778Dickeya zeae Ech1591, complete genome77.4203 %Subject ←→ Query33.4887
NC_016860:2323017*Salmonella enterica subsp. enterica serovar Typhimurium str79.0196 %Subject ←→ Query33.5197
NC_009381:222735Yersinia pestis Pestoides F chromosome, complete genome76.1274 %Subject ←→ Query33.5238
NC_016810:2325190*Salmonella enterica subsp. enterica serovar Typhimurium str79.0104 %Subject ←→ Query33.5449
NC_016857:2325190*Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7479.0104 %Subject ←→ Query33.5449
NC_016856:2379027*Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S79.0196 %Subject ←→ Query33.6556
NC_014304:77715Erwinia billingiae Eb661 plasmid pEB102, complete sequence76.2408 %Subject ←→ Query34.3324
NC_011353:921500Escherichia coli O157:H7 str. EC4115 chromosome, complete genome80.4442 %Subject ←→ Query34.5194
NC_011741:256932Escherichia coli IAI1 chromosome, complete genome80.9283 %Subject ←→ Query34.5956
CU928160:256932Escherichia coli IAI1 chromosome, complete genome80.9283 %Subject ←→ Query34.5956
NC_017265:4265659Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,75.9559 %Subject ←→ Query34.6939
NC_013892:753307Xenorhabdus bovienii SS-2004 chromosome, complete genome76.0631 %Subject ←→ Query34.8067
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome79.8652 %Subject ←→ Query34.8158
NC_013364:2522888Escherichia coli O111:H- str. 11128, complete genome88.1893 %Subject ←→ Query34.9313
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome76.2653 %Subject ←→ Query34.9445
NC_017046:2324554*Salmonella enterica subsp. enterica serovar Typhimurium str. 79879.0135 %Subject ←→ Query35.0182
NC_014618:4312295*Enterobacter cloacae SCF1 chromosome, complete genome77.6991 %Subject ←→ Query35.071
NC_013008:918215Escherichia coli O157:H7 str. TW14359 chromosome, complete genome84.2065 %Subject ←→ Query35.1897
NC_011353:2892265Escherichia coli O157:H7 str. EC4115 chromosome, complete genome88.5049 %Subject ←→ Query35.2611
NC_012125:1517925*Salmonella enterica subsp. enterica serovar Paratyphi C strain78.2966 %Subject ←→ Query35.3356
NC_014305:126029Erwinia billingiae Eb661 plasmid pEB170, complete sequence77.8125 %Subject ←→ Query35.5879
NC_014029:331919Yersinia pestis Z176003 chromosome, complete genome78.8971 %Subject ←→ Query35.6572
NC_016831:1865681Salmonella enterica subsp. enterica serovar Gallinarum/pullorum80.337 %Subject ←→ Query35.6576
NC_016831:687549*Salmonella enterica subsp. enterica serovar Gallinarum/pullorum78.0392 %Subject ←→ Query35.667
NC_011601:756885Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome84.2157 %Subject ←→ Query35.8585
NC_009832:1946401Serratia proteamaculans 568, complete genome80.5974 %Subject ←→ Query35.908
NC_011147:682897*Salmonella enterica subsp. enterica serovar Paratyphi A str75.7567 %Subject ←→ Query35.9573
NC_012779:2424967*Edwardsiella ictaluri 93-146, complete genome75.0123 %Subject ←→ Query35.992
NC_013364:3312379Escherichia coli O111:H- str. 11128, complete genome87.2212 %Subject ←→ Query36.0044
NC_011094:4442478Salmonella enterica subsp. enterica serovar Schwarzengrund str78.1066 %Subject ←→ Query36.096
NC_013941:2425233Escherichia coli O55:H7 str. CB9615 chromosome, complete genome87.1293 %Subject ←→ Query36.1047
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete78.2843 %Subject ←→ Query36.1113
NC_016832:687000*Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,78.8572 %Subject ←→ Query36.1337
NC_011601:1077548Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome83.5141 %Subject ←→ Query36.1989
NC_013961:3083816Erwinia amylovora, complete genome77.0987 %Subject ←→ Query36.2172
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence80.8732 %Subject ←→ Query36.3239
NC_009801:3374501*Escherichia coli E24377A, complete genome79.6783 %Subject ←→ Query36.3653
NC_016845:3238507*Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,78.6612 %Subject ←→ Query36.3698
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.7353 %Subject ←→ Query36.3874
NC_004431:1352906Escherichia coli CFT073, complete genome88.2721 %Subject ←→ Query36.4239
NC_017060:125480Rahnella aquatilis HX2 plasmid PRA1, complete sequence78.8266 %Subject ←→ Query36.427
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome88.5754 %Subject ←→ Query36.4725
NC_016612:5600177Klebsiella oxytoca KCTC 1686 chromosome, complete genome79.7426 %Subject ←→ Query36.4903
NC_012731:3193880*Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome78.0882 %Subject ←→ Query36.6801
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome100 %Subject ←→ Query36.7127
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome88.1924 %Subject ←→ Query36.813
NC_011094:638552Salmonella enterica subsp. enterica serovar Schwarzengrund str79.8591 %Subject ←→ Query36.8525
NC_009378:106193Yersinia pestis Pestoides F plasmid MT, complete sequence81.0815 %Subject ←→ Query36.8715
NC_011353:1195179*Escherichia coli O157:H7 str. EC4115 chromosome, complete genome88.3609 %Subject ←→ Query36.9832
NC_013941:1963523Escherichia coli O55:H7 str. CB9615 chromosome, complete genome88.9583 %Subject ←→ Query36.9893
NC_011294:2334979Salmonella enterica subsp. enterica serovar Enteritidis str76.4767 %Subject ←→ Query36.9998
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome75.4381 %Subject ←→ Query37.0151
NC_016863:2324293*Salmonella enterica subsp. enterica serovar Typhimurium str. UK-178.6857 %Subject ←→ Query37.0731
NC_013364:863209Escherichia coli O111:H- str. 11128, complete genome89.28 %Subject ←→ Query37.1558
NC_003198:2297837Salmonella enterica subsp. enterica serovar Typhi str. CT18,77.1569 %Subject ←→ Query37.159
NC_017168:1631052Yersinia pestis A1122 chromosome, complete genome76.2714 %Subject ←→ Query37.1693
NC_011205:2462025Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185376.8842 %Subject ←→ Query37.1954
NC_013008:2889743Escherichia coli O157:H7 str. TW14359 chromosome, complete genome89.5803 %Subject ←→ Query37.196
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome88.7531 %Subject ←→ Query37.275
NC_011274:2325840Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9176.7188 %Subject ←→ Query37.3546
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,77.2028 %Subject ←→ Query37.4165
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome81.9363 %Subject ←→ Query37.4593
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str76.9761 %Subject ←→ Query37.6094
NC_013892:1503162Xenorhabdus bovienii SS-2004 chromosome, complete genome76.5074 %Subject ←→ Query37.6494
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome87.0619 %Subject ←→ Query37.6581
NC_013361:2169948Escherichia coli O26:H11 str. 11368 chromosome, complete genome87.9626 %Subject ←→ Query37.7614
NC_020063:2077233Enterobacteriaceae bacterium strain FGI 57, complete genome75.9314 %Subject ←→ Query37.7941
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome76.2714 %Subject ←→ Query37.8586
NC_016822:1839739Shigella sonnei 53G, complete genome80.8517 %Subject ←→ Query37.9198
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,75.4596 %Subject ←→ Query38.0253
NC_007385:157516Shigella sonnei Ss046 plasmid pSS_046, complete sequence83.4099 %Subject ←→ Query38.0958
NC_013008:1761165Escherichia coli O157:H7 str. TW14359 chromosome, complete genome95.2665 %Subject ←→ Query38.2113
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome77.8278 %Subject ←→ Query38.2235
NC_013361:1896446Escherichia coli O26:H11 str. 11368 chromosome, complete genome90.5239 %Subject ←→ Query38.2296
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome75.4657 %Subject ←→ Query38.2879
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome89.6048 %Subject ←→ Query38.4667
NC_011353:1761977Escherichia coli O157:H7 str. EC4115 chromosome, complete genome93.4559 %Subject ←→ Query38.5032
NC_020260:312805Cronobacter sakazakii Sp291, complete genome76.6544 %Subject ←→ Query38.5624
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome85.4534 %Subject ←→ Query38.6045
NC_011205:329155Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185378.8051 %Subject ←→ Query38.7596
NC_011742:585908Escherichia coli S88 chromosome, complete genome87.9749 %Subject ←→ Query38.828
NC_011353:261220Escherichia coli O157:H7 str. EC4115 chromosome, complete genome78.9062 %Subject ←→ Query38.9884
NC_011750:2009889Escherichia coli IAI39 chromosome, complete genome80.3983 %Subject ←→ Query39.0625
NC_013008:261226Escherichia coli O157:H7 str. TW14359 chromosome, complete genome78.9246 %Subject ←→ Query39.1965
NC_013941:261094Escherichia coli O55:H7 str. CB9615 chromosome, complete genome79.0502 %Subject ←→ Query39.1987
NC_016822:267758Shigella sonnei 53G, complete genome82.4939 %Subject ←→ Query39.2695
NC_011274:1129686Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9181.3113 %Subject ←→ Query39.5488
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome76.5901 %Subject ←→ Query39.7546
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome79.2739 %Subject ←→ Query39.836
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome76.106 %Subject ←→ Query40.1776
NC_013361:1593543Escherichia coli O26:H11 str. 11368 chromosome, complete genome87.2365 %Subject ←→ Query40.2481
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete82.2028 %Subject ←→ Query40.59
NC_016818:2542295*Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, complete77.4877 %Subject ←→ Query40.8603
NC_013592:1424560Dickeya dadantii Ech586, complete genome76.9761 %Subject ←→ Query41.2418
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome77.5276 %Subject ←→ Query41.4806
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome78.5815 %Subject ←→ Query41.5453
NC_016514:1701273*Enterobacter cloacae EcWSU1 chromosome, complete genome76.8474 %Subject ←→ Query41.5702
NC_016845:1773416Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,81.1673 %Subject ←→ Query41.6817
NC_016514:1627664*Enterobacter cloacae EcWSU1 chromosome, complete genome78.2567 %Subject ←→ Query41.7029
NC_011283:2103500*Klebsiella pneumoniae 342 chromosome, complete genome76.6667 %Subject ←→ Query42.41
NC_015761:2227500Salmonella bongori NCTC 12419, complete genome76.0049 %Subject ←→ Query42.5785
NC_012731:2302974Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome77.1507 %Subject ←→ Query43.1245
NC_016846:24500Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,79.4026 %Subject ←→ Query43.5812
NC_017047:2260118Rahnella aquatilis HX2 chromosome, complete genome75.2206 %Subject ←→ Query43.6923
NC_014500:3175283Dickeya dadantii 3937 chromosome, complete genome75.1471 %Subject ←→ Query44.4588
NC_010660:175200*Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence81.4185 %Subject ←→ Query46.3542
NC_011283:1901229*Klebsiella pneumoniae 342 chromosome, complete genome78.5447 %Subject Query49.5744
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome78.0453 %Subject Query49.6231
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome77.7543 %Subject Query50.7802