Pre_GI: OUP Neighbours

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Query: NC_013198:511795 Lactobacillus rhamnosus GG, complete genome

D: 31.25

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

Number of Neighbours: 73

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Select all Donors or Recipients for Query Island

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015222:2475792*Nitrosomonas sp. AL212 chromosome, complete genome75.3738 %Subject ←→ Query26.7854
NC_015731:1731896Nitrosomonas sp. Is79A3 chromosome, complete genome75.9804 %Subject ←→ Query27.058
NC_010999:2516000Lactobacillus casei, complete genome82.356 %Subject ←→ Query27.1158
NC_015731:1062824*Nitrosomonas sp. Is79A3 chromosome, complete genome76.3848 %Subject ←→ Query27.365
NC_015222:523915Nitrosomonas sp. AL212 chromosome, complete genome75.5239 %Subject ←→ Query27.4514
NC_014334:1848340*Lactobacillus casei str. Zhang chromosome, complete genome78.5325 %Subject ←→ Query27.6265
NC_010473:2548946*Escherichia coli str. K-12 substr. DH10B, complete genome75.5239 %Subject ←→ Query27.6552
NC_015222:1492500Nitrosomonas sp. AL212 chromosome, complete genome76.2163 %Subject ←→ Query27.6569
NC_015731:169989Nitrosomonas sp. Is79A3 chromosome, complete genome78.1281 %Subject ←→ Query27.6873
NC_015222:1749553*Nitrosomonas sp. AL212 chromosome, complete genome75.4749 %Subject ←→ Query27.7237
NC_015222:1905194*Nitrosomonas sp. AL212 chromosome, complete genome75.7537 %Subject ←→ Query27.742
CP002516:1419413Escherichia coli KO11, complete genome75.625 %Subject ←→ Query27.8755
NC_010999:2450974*Lactobacillus casei, complete genome83.2353 %Subject ←→ Query28.2344
NC_008150:4561633*Yersinia pestis Antiqua, complete genome75.0888 %Subject ←→ Query28.4594
NC_000913:2028472*Escherichia coli K12, complete genome75.0214 %Subject ←→ Query28.4675
AC_000091:2027648*Escherichia coli W3110 DNA, complete genome75.5392 %Subject ←→ Query28.5209
CP002516:1902431*Escherichia coli KO11, complete genome75.5484 %Subject ←→ Query28.6874
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome84.0533 %Subject ←→ Query28.9383
NC_010473:2119480*Escherichia coli str. K-12 substr. DH10B, complete genome76.6973 %Subject ←→ Query28.9543
NC_000913:2455037*Escherichia coli K12, complete genome75.0153 %Subject ←→ Query29.0536
NC_015224:2095816*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.0919 %Subject ←→ Query29.2437
NC_003143:483395*Yersinia pestis CO92, complete genome75.2482 %Subject ←→ Query29.2984
NC_010159:409500*Yersinia pestis Angola, complete genome75.2237 %Subject ←→ Query29.3874
NC_015224:2061951*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.2175 %Subject ←→ Query29.6
NC_014334:99000*Lactobacillus casei str. Zhang chromosome, complete genome80.8303 %Subject ←→ Query29.7551
NC_005810:4224500Yersinia pestis biovar Microtus str. 91001, complete genome75.5116 %Subject ←→ Query29.8821
NC_008149:402599*Yersinia pestis Nepal516, complete genome75.4442 %Subject ←→ Query30.0082
NC_006155:713174*Yersinia pseudotuberculosis IP 32953, complete genome75.8487 %Subject ←→ Query30.0948
AC_000091:2462461Escherichia coli W3110 DNA, complete genome75.0153 %Subject ←→ Query30.0984
CP002185:1493280*Escherichia coli W, complete genome76.0141 %Subject ←→ Query30.2623
NC_007946:2625461Escherichia coli UTI89, complete genome75.864 %Subject ←→ Query30.6978
NC_011751:643976*Escherichia coli UMN026 chromosome, complete genome75.0919 %Subject ←→ Query30.7806
CP002185:2181936*Escherichia coli W, complete genome75.0827 %Subject ←→ Query30.946
CU928145:2708500Escherichia coli 55989 chromosome, complete genome75.9988 %Subject ←→ Query30.9673
NC_011748:2708500Escherichia coli 55989, complete genome75.9988 %Subject ←→ Query30.9673
NC_015731:447411Nitrosomonas sp. Is79A3 chromosome, complete genome75.9896 %Subject ←→ Query31.3594
NC_007613:2376974*Shigella boydii Sb227, complete genome75.4902 %Subject ←→ Query31.4249
NC_009800:2505872*Escherichia coli HS, complete genome75.0827 %Subject ←→ Query31.8884
NC_013199:1966334*Lactobacillus rhamnosus Lc 705, complete genome80.1379 %Subject ←→ Query31.9404
AP010958:2911741*Escherichia coli O103:H2 str. 12009 DNA, complete genome75.7567 %Subject ←→ Query32.0176
NC_010465:2582080*Yersinia pseudotuberculosis YPIII, complete genome75.0245 %Subject ←→ Query32.0464
NC_008149:1842500*Yersinia pestis Nepal516, complete genome75.1072 %Subject ←→ Query32.1465
NC_008150:1705152*Yersinia pestis Antiqua, complete genome75.6097 %Subject ←→ Query32.6597
NC_014334:589526Lactobacillus casei str. Zhang chromosome, complete genome83.027 %Subject ←→ Query32.7578
NC_010999:252605Lactobacillus casei, complete genome77.2335 %Subject ←→ Query32.847
NC_010498:4856011Escherichia coli SMS-3-5, complete genome75.625 %Subject ←→ Query33.1043
NC_015572:2186394Methylomonas methanica MC09 chromosome, complete genome75.0766 %Subject ←→ Query33.1331
NC_002655:3260500*Escherichia coli O157:H7 EDL933, complete genome77.2702 %Subject ←→ Query33.8151
NC_002695:3189425*Escherichia coli O157:H7 str. Sakai, complete genome76.6422 %Subject ←→ Query33.8405
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome77.5888 %Subject ←→ Query34.0009
NC_010465:3431500*Yersinia pseudotuberculosis YPIII, complete genome75.8395 %Subject ←→ Query34.3332
NC_015731:3658956*Nitrosomonas sp. Is79A3 chromosome, complete genome75.6127 %Subject ←→ Query34.5275
NC_008526:250000*Lactobacillus casei ATCC 334, complete genome75.913 %Subject ←→ Query35.0097
NC_014334:267409*Lactobacillus casei str. Zhang chromosome, complete genome77.7911 %Subject ←→ Query35.3356
NC_010554:2646806Proteus mirabilis HI4320, complete genome75.3554 %Subject ←→ Query35.3988
NC_008526:1822000*Lactobacillus casei ATCC 334, complete genome75.3707 %Subject ←→ Query35.8686
NC_010999:1979989*Lactobacillus casei, complete genome77.0098 %Subject ←→ Query36.6636
NC_012691:779826*Tolumonas auensis DSM 9187, complete genome76.1244 %Subject ←→ Query36.9103
NC_014334:1775781*Lactobacillus casei str. Zhang chromosome, complete genome77.4939 %Subject ←→ Query36.9239
NC_014010:1850500Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete76.8076 %Subject ←→ Query36.9283
NC_004349:3938Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence77.405 %Subject ←→ Query38.1809
NC_013730:2359939Spirosoma linguale DSM 74, complete genome75.3278 %Subject ←→ Query38.4788
NC_012691:2146473Tolumonas auensis DSM 9187, complete genome75.0245 %Subject ←→ Query38.7833
NC_014334:769205*Lactobacillus casei str. Zhang chromosome, complete genome78.0944 %Subject ←→ Query39.1896
NC_007712:1219957Sodalis glossinidius str. 'morsitans', complete genome76.3756 %Subject ←→ Query39.2078
NC_007606:1999870Shigella dysenteriae Sd197, complete genome75.3983 %Subject ←→ Query40.5837
NC_015554:4724245*Alteromonas sp. SN2 chromosome, complete genome75.0888 %Subject Query42.0329
NC_011751:2327014Escherichia coli UMN026 chromosome, complete genome75.7414 %Subject Query42.5185
NC_015567:1660462Serratia sp. AS9 chromosome, complete genome76.1673 %Subject Query42.6158
NC_015566:1659288Serratia sp. AS12 chromosome, complete genome75.8027 %Subject Query44.7005
NC_008573:195317Shewanella sp. ANA-3 plasmid 1, complete sequence76.9884 %Subject Query46.5154
NC_010611:240839Acinetobacter baumannii ACICU, complete genome77.4755 %Subject Query48.2217
NC_009792:3665369Citrobacter koseri ATCC BAA-895, complete genome75.4963 %Subject Query51.8195