Pre_GI: OUP Neighbours

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Query: NC_012984:2681548 Lactobacillus plantarum JDM1, complete genome

D: 29.4747

Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a Chinese commercial lactic acid bacterium with several probiotic functions. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.

Number of Neighbours: 43




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015497:1287877Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome75.1348 %Subject ←→ Query27.577
NC_002940:1065246*Haemophilus ducreyi 35000HP, complete genome76.057 %Subject ←→ Query24.9088
NC_015214:1700000*Lactobacillus acidophilus 30SC chromosome, complete genome75.6127 %Subject ←→ Query30.2107
NC_014724:1731238*Lactobacillus amylovorus GRL 1112 chromosome, complete genome75.1317 %Subject ←→ Query26.547
NC_015428:1544728*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome77.1875 %Subject ←→ Query25.6452
NC_015420:35384Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, complete75.6127 %Subject Query17.7985
NC_010610:755000*Lactobacillus fermentum IFO 3956, complete genome77.2212 %Subject ←→ Query39.2062
NC_010080:1685280*Lactobacillus helveticus DPC 4571, complete genome75.1348 %Subject ←→ Query27.4936
NC_012984:2709148Lactobacillus plantarum JDM1, complete genome77.595 %Subject ←→ Query29.0035
NC_012984:1074721Lactobacillus plantarum JDM1, complete genome77.8707 %Subject ←→ Query29.7281
NC_012984:3077004Lactobacillus plantarum JDM1, complete genome80.2145 %Subject ←→ Query28.2101
NC_004567:1089231Lactobacillus plantarum WCFS1, complete genome81.8076 %Subject ←→ Query31.1476
NC_004567:1066710Lactobacillus plantarum WCFS1, complete genome78.6581 %Subject ←→ Query29.9854
NC_004567:343500Lactobacillus plantarum WCFS1, complete genome81.152 %Subject ←→ Query30.9556
NC_009513:169146*Lactobacillus reuteri F275, complete genome77.117 %Subject ←→ Query30.5164
NC_015697:116000*Lactobacillus reuteri SD2112 chromosome, complete genome77.2396 %Subject ←→ Query22.793
NC_007576:435713*Lactobacillus sakei subsp. sakei 23K, complete genome76.0172 %Subject ←→ Query35.5911
NC_007576:299266*Lactobacillus sakei subsp. sakei 23K, complete genome76.3664 %Subject ←→ Query32.1055
NC_007576:471500*Lactobacillus sakei subsp. sakei 23K, complete genome78.0944 %Subject ←→ Query32.0931
NC_015978:352478*Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete75.9038 %Subject ←→ Query24.2022
NC_015978:32875Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete75.8241 %Subject ←→ Query21.308
NC_003212:2837366Listeria innocua Clip11262, complete genome76.4982 %Subject ←→ Query22.3675
NC_003210:2749538Listeria monocytogenes EGD-e, complete genome76.3419 %Subject ←→ Query22.7809
NC_013891:2643085Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome75.9559 %Subject ←→ Query22.9815
NC_009654:3316458*Marinomonas sp. MWYL1, complete genome76.1305 %Subject ←→ Query32.1528
NC_008528:331260Oenococcus oeni PSU-1, complete genome76.3542 %Subject ←→ Query32.0829
NC_008525:561000Pediococcus pentosaceus ATCC 25745, complete genome81.3756 %Subject ←→ Query28.0034
NC_006371:1997954*Photobacterium profundum SS9 chromosome 2, complete sequence77.5184 %Subject ←→ Query35.2715
NC_009052:1899954Shewanella baltica OS155, complete genome75.9406 %Subject ←→ Query31.5886
NC_009052:1211989*Shewanella baltica OS155, complete genome77.3774 %Subject ←→ Query30.5674
NC_009997:3661083Shewanella baltica OS195, complete genome75.2574 %Subject ←→ Query27.3924
NC_009997:1368471*Shewanella baltica OS195, complete genome76.0417 %Subject ←→ Query29.5659
NC_008345:3394154*Shewanella frigidimarina NCIMB 400, complete genome75.9007 %Subject ←→ Query27.2838
NC_008345:3199965Shewanella frigidimarina NCIMB 400, complete genome79.2555 %Subject ←→ Query25.0699
NC_004347:3670145*Shewanella oneidensis MR-1, complete genome76.9516 %Subject ←→ Query29.9322
NC_008321:3512471Shewanella sp. MR-4, complete genome75.7476 %Subject ←→ Query30.0796
NC_008322:2716676Shewanella sp. MR-7, complete genome76.5319 %Subject ←→ Query32.7019
NC_015759:667505Weissella koreensis KACC 15510 chromosome, complete genome75.383 %Subject Query18.218
NC_015759:1117122Weissella koreensis KACC 15510 chromosome, complete genome75.5576 %Subject Query16.9808
NC_005810:2180303*Yersinia pestis biovar Microtus str. 91001, complete genome75.72 %Subject ←→ Query33.5745
NC_006155:2461262*Yersinia pseudotuberculosis IP 32953, complete genome75.0031 %Subject ←→ Query34.0957
NC_010634:2376245*Yersinia pseudotuberculosis PB1/+, complete genome75.3339 %Subject ←→ Query34.4786
NC_010465:2282874Yersinia pseudotuberculosis YPIII, complete genome75.3217 %Subject ←→ Query29.8112