Pre_GI: OUP Neighbours

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Query: NC_012962:3864000 Photorhabdus asymbiotica, complete genome

D: 31.492

Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.

Number of Neighbours: 39




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005126:1265071Photorhabdus luminescens subsp. laumondii TTO1, complete genome82.5858 %Subject ←→ Query37.9976
NC_012962:1661683Photorhabdus asymbiotica, complete genome82.2763 %Subject ←→ Query40.4188
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome78.6458 %Subject ←→ Query37.8586
NC_012962:3568046Photorhabdus asymbiotica, complete genome78.2598 %Subject ←→ Query37.813
NC_005126:589000Photorhabdus luminescens subsp. laumondii TTO1, complete genome78.1281 %Subject Query42.3176
NC_014228:3022903Xenorhabdus nematophila ATCC 19061, complete genome77.9902 %Subject ←→ Query39.1304
NC_014228:2883500Xenorhabdus nematophila ATCC 19061, complete genome77.7941 %Subject ←→ Query39.0811
NC_010694:2189652*Erwinia tasmaniensis, complete genome77.7757 %Subject ←→ Query37.4179
NC_013592:3397304Dickeya dadantii Ech586, complete genome77.595 %Subject ←→ Query32.6808
NC_014306:2476316Erwinia billingiae Eb661, complete genome77.2059 %Subject ←→ Query32.9311
NC_010694:614985Erwinia tasmaniensis, complete genome76.6759 %Subject ←→ Query35.5876
NC_015663:1902344*Enterobacter aerogenes KCTC 2190 chromosome, complete genome76.5778 %Subject ←→ Query31.1284
NC_012880:2778795Dickeya dadantii Ech703, complete genome76.5227 %Subject ←→ Query36.5333
NC_010067:632683Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete76.296 %Subject ←→ Query35.8098
NC_013592:3618248*Dickeya dadantii Ech586, complete genome76.1642 %Subject ←→ Query34.4581
NC_010159:1101241Yersinia pestis Angola, complete genome76.0784 %Subject ←→ Query33.9894
NC_012912:2800884*Dickeya zeae Ech1591, complete genome76.057 %Subject ←→ Query31.095
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence76.0539 %Subject ←→ Query31.1132
NC_012880:3645304Dickeya dadantii Ech703, complete genome76.0325 %Subject ←→ Query33.3293
NC_014562:1883517*Pantoea vagans C9-1 chromosome, complete genome76.0202 %Subject ←→ Query34.2182
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome75.9252 %Subject ←→ Query41.4806
NC_004088:3955933Yersinia pestis KIM, complete genome75.9099 %Subject ←→ Query33.4603
NC_008150:3529430Yersinia pestis Antiqua, complete genome75.8333 %Subject ←→ Query31.4433
NC_014500:1646854*Dickeya dadantii 3937 chromosome, complete genome75.7721 %Subject ←→ Query37.9513
NC_012779:2856051Edwardsiella ictaluri 93-146, complete genome75.6434 %Subject ←→ Query40.677
NC_008149:2411161Yersinia pestis Nepal516, complete genome75.579 %Subject ←→ Query32.2349
NC_012880:1127997*Dickeya dadantii Ech703, complete genome75.5576 %Subject ←→ Query30.9614
NC_010634:4045794Yersinia pseudotuberculosis PB1/+, complete genome75.4688 %Subject ←→ Query34.0011
NC_006155:3040769Yersinia pseudotuberculosis IP 32953, complete genome75.4657 %Subject ←→ Query31.1041
NC_012880:2480000Dickeya dadantii Ech703, complete genome75.4013 %Subject ←→ Query30.1678
NC_006155:4105542Yersinia pseudotuberculosis IP 32953, complete genome75.3983 %Subject ←→ Query34.268
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,75.3248 %Subject ←→ Query37.9381
NC_010465:1724000Yersinia pseudotuberculosis YPIII, complete genome75.2941 %Subject ←→ Query32.6727
NC_005810:2613456Yersinia pestis biovar Microtus str. 91001, complete genome75.2604 %Subject ←→ Query33.9433
NC_003143:2849377Yersinia pestis CO92, complete genome75.2451 %Subject ←→ Query33.8521
NC_010159:1861465Yersinia pestis Angola, complete genome75.2053 %Subject ←→ Query33.8947
NC_005126:949226Photorhabdus luminescens subsp. laumondii TTO1, complete genome75.1348 %Subject ←→ Query32.4514
NC_012779:1449500*Edwardsiella ictaluri 93-146, complete genome75.0613 %Subject Query41.6091
NC_012917:4328463Pectobacterium carotovorum subsp. carotovorum PC1, complete genome75.0368 %Subject ←→ Query31.405