Pre_GI: OUP Neighbours

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Query: NC_012962:3568046 Photorhabdus asymbiotica, complete genome

D: 37.813

Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.

Number of Neighbours: 50

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015224:279037Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.5362 %Subject ←→ Query28.7938
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome79.0227 %Subject ←→ Query29.1646
NC_008149:3648139Yersinia pestis Nepal516, complete genome76.8842 %Subject ←→ Query29.4565
NC_010465:804249Yersinia pseudotuberculosis YPIII, complete genome76.5809 %Subject ←→ Query29.499
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome77.0588 %Subject ←→ Query29.5112
NC_012912:4737703Dickeya zeae Ech1591, complete genome75.2849 %Subject ←→ Query29.5142
NC_003143:4006884Yersinia pestis CO92, complete genome75.3125 %Subject ←→ Query29.6176
NC_008150:3711953Yersinia pestis Antiqua, complete genome77.2396 %Subject ←→ Query29.7483
NC_008150:2599661Yersinia pestis Antiqua, complete genome75.4228 %Subject ←→ Query29.7787
NC_008149:4053363Yersinia pestis Nepal516, complete genome76.5043 %Subject ←→ Query30.0006
NC_004088:266543Yersinia pestis KIM, complete genome76.5564 %Subject ←→ Query30.0081
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome75.9681 %Subject ←→ Query30.1556
NC_012880:1711062*Dickeya dadantii Ech703, complete genome77.7482 %Subject ←→ Query30.2924
NC_010634:4234932Yersinia pseudotuberculosis PB1/+, complete genome76.4093 %Subject ←→ Query30.3016
NC_012880:1127997*Dickeya dadantii Ech703, complete genome78.5049 %Subject ←→ Query30.9614
NC_012912:2800884*Dickeya zeae Ech1591, complete genome76.8597 %Subject ←→ Query31.095
NC_006155:3040769Yersinia pseudotuberculosis IP 32953, complete genome77.6103 %Subject ←→ Query31.1041
NC_010634:2960000Yersinia pseudotuberculosis PB1/+, complete genome77.7911 %Subject ←→ Query31.2014
NC_012962:3864000*Photorhabdus asymbiotica, complete genome78.2598 %Subject ←→ Query31.492
NC_004088:1801819Yersinia pestis KIM, complete genome77.6654 %Subject ←→ Query31.8002
NC_008149:2411161Yersinia pestis Nepal516, complete genome77.8523 %Subject ←→ Query32.2349
NC_012912:1229333Dickeya zeae Ech1591, complete genome75.2696 %Subject ←→ Query32.2592
NC_012912:325913Dickeya zeae Ech1591, complete genome75.2267 %Subject ←→ Query32.3565
NC_013421:1954915*Pectobacterium wasabiae WPP163, complete genome76.8536 %Subject ←→ Query32.6483
NC_010465:1724000Yersinia pseudotuberculosis YPIII, complete genome77.4265 %Subject ←→ Query32.6727
NC_013592:3397304Dickeya dadantii Ech586, complete genome77.981 %Subject ←→ Query32.6808
NC_010634:1565788Yersinia pseudotuberculosis PB1/+, complete genome77.4816 %Subject ←→ Query33.0113
NC_006155:1567306Yersinia pseudotuberculosis IP 32953, complete genome77.9289 %Subject ←→ Query33.2342
NC_012880:3645304Dickeya dadantii Ech703, complete genome76.0509 %Subject ←→ Query33.3293
NC_003143:2849377Yersinia pestis CO92, complete genome77.7451 %Subject ←→ Query33.8521
NC_010159:1861465Yersinia pestis Angola, complete genome77.7788 %Subject ←→ Query33.8947
NC_005810:2613456Yersinia pestis biovar Microtus str. 91001, complete genome77.7482 %Subject ←→ Query33.9433
NC_010995:2855595*Cellvibrio japonicus Ueda107, complete genome77.1691 %Subject ←→ Query34.0726
NC_013592:3618248*Dickeya dadantii Ech586, complete genome77.3958 %Subject ←→ Query34.4581
NC_009792:808332Citrobacter koseri ATCC BAA-895, complete genome76.2439 %Subject ←→ Query35.0274
NC_010067:632683Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete75.1562 %Subject ←→ Query35.8098
NC_009832:1946401Serratia proteamaculans 568, complete genome75.4902 %Subject ←→ Query35.908
NC_013421:1545386Pectobacterium wasabiae WPP163, complete genome75.671 %Subject ←→ Query35.9253
NC_013421:1143500Pectobacterium wasabiae WPP163, complete genome76.0938 %Subject ←→ Query36.4256
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome75.3799 %Subject ←→ Query37.0151
NC_014394:3036758Gallionella capsiferriformans ES-2 chromosome, complete genome76.3756 %Subject ←→ Query37.5243
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome76.5319 %Subject ←→ Query37.8586
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,78.364 %Subject ←→ Query37.9381
NC_005126:1265071Photorhabdus luminescens subsp. laumondii TTO1, complete genome81.3542 %Subject ←→ Query37.9976
NC_010814:794211Geobacter lovleyi SZ, complete genome76.3205 %Subject ←→ Query38.4543
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome75.8333 %Subject ←→ Query38.4667
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome75.7476 %Subject ←→ Query39.836
NC_012962:1661683Photorhabdus asymbiotica, complete genome84.6232 %Subject ←→ Query40.4188
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome81.0723 %Subject ←→ Query41.4806
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.0858 %Subject Query50.7802