Pre_GI: OUP Neighbours

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Query: NC_012779:305969 Edwardsiella ictaluri 93-146, complete genome

D: 39.836

Host Lineage: Edwardsiella ictaluri; Edwardsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Edwardsiella ictaluri is the causative agent of enteric septicemia in catfish (ESC), an economically significant disease of farm-raised catfish. The acute form of ESC causes bacterial septicemia (proliferation of bacteria in the blood) which rapidly leads to death. The chronic form of this disease causes a characteristic head lesion, and may also proceed to septicemia and death. Two plasmids, which are consistently present in Edwardsiella ictaluri isolates, have been sequenced. Both plasmids contain genes for the type III secretory system, which is involved in translocating pathogenicity proteins into the eukaryotic cell.

Number of Neighbours: 88




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence76.1029 %Subject Query28.1767
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome75.5852 %Subject Query29.1646
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome76.7524 %Subject Query29.5112
NC_003143:4006884Yersinia pestis CO92, complete genome75.5086 %Subject Query29.6176
NC_008149:4053363Yersinia pestis Nepal516, complete genome76.0018 %Subject ←→ Query30.0006
NC_004088:266543Yersinia pestis KIM, complete genome76.0846 %Subject ←→ Query30.0081
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome75.1716 %Subject ←→ Query30.1556
NC_010634:4234932Yersinia pseudotuberculosis PB1/+, complete genome75.3799 %Subject ←→ Query30.3016
NC_014562:1935088Pantoea vagans C9-1 chromosome, complete genome75.8701 %Subject ←→ Query30.3988
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence77.6348 %Subject ←→ Query31.1132
NC_009832:358291Serratia proteamaculans 568, complete genome76.201 %Subject ←→ Query31.5844
NC_013282:3719500*Cronobacter turicensis, complete genome75.3646 %Subject ←→ Query31.6817
NC_008563:3119284Escherichia coli APEC O1, complete genome78.2414 %Subject ←→ Query31.9127
NC_014500:3519722Dickeya dadantii 3937 chromosome, complete genome75.0888 %Subject ←→ Query32.164
NC_012912:1229333Dickeya zeae Ech1591, complete genome76.1765 %Subject ←→ Query32.2592
NC_013592:3397304Dickeya dadantii Ech586, complete genome76.0263 %Subject ←→ Query32.6808
NC_013508:1262333Edwardsiella tarda EIB202, complete genome77.1998 %Subject ←→ Query32.8692
NC_010634:1565788Yersinia pseudotuberculosis PB1/+, complete genome75.1777 %Subject ←→ Query33.0113
NC_006155:1567306Yersinia pseudotuberculosis IP 32953, complete genome75.2328 %Subject ←→ Query33.2342
NC_012779:1820244*Edwardsiella ictaluri 93-146, complete genome76.3603 %Subject ←→ Query33.3621
NC_012912:2285778Dickeya zeae Ech1591, complete genome76.636 %Subject ←→ Query33.4887
NC_012779:3652737Edwardsiella ictaluri 93-146, complete genome77.3468 %Subject ←→ Query33.7001
NC_012779:2664849Edwardsiella ictaluri 93-146, complete genome76.829 %Subject ←→ Query33.7832
NC_004547:3817656Erwinia carotovora subsp. atroseptica SCRI1043, complete genome77.3192 %Subject ←→ Query34.15
NC_012779:3570720*Edwardsiella ictaluri 93-146, complete genome75.3033 %Subject ←→ Query34.4297
NC_013508:3593000Edwardsiella tarda EIB202, complete genome76.7708 %Subject ←→ Query34.4706
NC_012779:1939747Edwardsiella ictaluri 93-146, complete genome77.7819 %Subject ←→ Query34.6849
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome77.546 %Subject ←→ Query34.8158
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome78.6366 %Subject ←→ Query34.9445
NC_009792:808332Citrobacter koseri ATCC BAA-895, complete genome78.1985 %Subject ←→ Query35.0274
NC_010694:3055403Erwinia tasmaniensis, complete genome78.3885 %Subject ←→ Query35.0644
NC_012779:1629731Edwardsiella ictaluri 93-146, complete genome76.0999 %Subject ←→ Query35.0944
NC_010694:614985Erwinia tasmaniensis, complete genome77.2273 %Subject ←→ Query35.5876
NC_010067:632683Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete76.8045 %Subject ←→ Query35.8098
NC_009832:1946401Serratia proteamaculans 568, complete genome79.3995 %Subject ←→ Query35.908
NC_012779:2424967*Edwardsiella ictaluri 93-146, complete genome80.1042 %Subject ←→ Query35.992
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete78.1863 %Subject ←→ Query36.1113
NC_013961:3083816Erwinia amylovora, complete genome77.6562 %Subject ←→ Query36.2172
NC_009801:3374501*Escherichia coli E24377A, complete genome75.2727 %Subject ←→ Query36.3653
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.8873 %Subject ←→ Query36.3874
NC_004431:1352906Escherichia coli CFT073, complete genome78.7255 %Subject ←→ Query36.4239
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome76.3205 %Subject ←→ Query36.4725
NC_012880:2778795Dickeya dadantii Ech703, complete genome75.7812 %Subject ←→ Query36.5333
NC_009648:3720000*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.6587 %Subject ←→ Query36.7036
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome78.4865 %Subject ←→ Query36.7127
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome77.9718 %Subject ←→ Query36.813
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome81.5686 %Subject ←→ Query37.0151
NC_008150:1420825*Yersinia pestis Antiqua, complete genome75.1042 %Subject ←→ Query37.0184
NC_005810:1794490*Yersinia pestis biovar Microtus str. 91001, complete genome75.2267 %Subject ←→ Query37.035
NC_007712:433500Sodalis glossinidius str. 'morsitans', complete genome75.1654 %Subject ←→ Query37.0845
NC_003198:2297837Salmonella enterica subsp. enterica serovar Typhi str. CT18,77.0987 %Subject ←→ Query37.159
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome77.8002 %Subject ←→ Query37.275
NC_003143:2137945*Yersinia pestis CO92, complete genome75.2022 %Subject ←→ Query37.3318
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,77.2335 %Subject ←→ Query37.4165
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome79.9969 %Subject ←→ Query37.4593
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str77.3254 %Subject ←→ Query37.6094
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome77.2855 %Subject ←→ Query37.6581
NC_012962:3568046Photorhabdus asymbiotica, complete genome75.7476 %Subject ←→ Query37.813
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome76.6789 %Subject ←→ Query37.8586
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,77.7328 %Subject ←→ Query37.9381
NC_014500:1646854*Dickeya dadantii 3937 chromosome, complete genome75.9988 %Subject ←→ Query37.9513
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,76.1183 %Subject ←→ Query38.0253
NC_007385:157516Shigella sonnei Ss046 plasmid pSS_046, complete sequence77.981 %Subject ←→ Query38.0958
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome75.6985 %Subject ←→ Query38.2235
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome77.7114 %Subject ←→ Query38.2879
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome78.1311 %Subject ←→ Query38.4667
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome78.3885 %Subject ←→ Query38.6045
NC_013282:1256769Cronobacter turicensis, complete genome76.4828 %Subject ←→ Query38.8742
NC_011750:2009889Escherichia coli IAI39 chromosome, complete genome76.8781 %Subject ←→ Query39.0625
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome81.5441 %Subject ←→ Query39.7546
NC_012779:996879Edwardsiella ictaluri 93-146, complete genome77.4357 %Subject ←→ Query39.7678
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome78.8205 %Subject ←→ Query40.1776
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete78.0055 %Subject ←→ Query40.59
NC_012779:2856051Edwardsiella ictaluri 93-146, complete genome76.7524 %Subject ←→ Query40.677
NC_013592:1424560Dickeya dadantii Ech586, complete genome75.6955 %Subject ←→ Query41.2418
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome76.011 %Subject ←→ Query41.4806
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome78.7623 %Subject ←→ Query41.5453
NC_012779:1449500*Edwardsiella ictaluri 93-146, complete genome78.5601 %Subject ←→ Query41.6091
NC_013508:876431*Edwardsiella tarda EIB202, complete genome75.4718 %Subject ←→ Query41.7282
NC_014500:3175283Dickeya dadantii 3937 chromosome, complete genome75.2849 %Subject ←→ Query44.4588
NC_013508:2356865*Edwardsiella tarda EIB202, complete genome76.4767 %Subject ←→ Query44.5077
NC_008343:1548020*Granulibacter bethesdensis CGDNIH1, complete genome75.7629 %Subject ←→ Query44.918
NC_012779:1286500Edwardsiella ictaluri 93-146, complete genome75.2267 %Subject ←→ Query45.1799
NC_012779:2586175Edwardsiella ictaluri 93-146, complete genome79.424 %Subject ←→ Query45.323
NC_010660:175200*Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence75.5116 %Subject ←→ Query46.3542
NC_012779:2957000Edwardsiella ictaluri 93-146, complete genome75.0919 %Subject ←→ Query46.4521
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome79.0472 %Subject ←→ Query49.6231
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome80.5208 %Subject Query50.7802