Pre_GI: OUP Neighbours

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Query: NC_012578:2479150 Vibrio cholerae M66-2 chromosome I, complete sequence

D: 32.4052

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Number of Neighbours: 122




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005140:340000Vibrio vulnificus YJ016 chromosome II, complete sequence81.1979 %Subject ←→ Query26.4713
NC_005140:1820970Vibrio vulnificus YJ016 chromosome II, complete sequence80.0061 %Subject ←→ Query27.8788
NC_005140:960261Vibrio vulnificus YJ016 chromosome II, complete sequence75.2604 %Subject ←→ Query28.0411
NC_014366:478000*Gamma proteobacterium HdN1, complete genome75.9007 %Subject ←→ Query28.2485
NC_009665:4675289*Shewanella baltica OS185 chromosome, complete genome75.7261 %Subject ←→ Query28.3378
NC_017270:1755552*Vibrio cholerae LMA3984-4 chromosome chromosome I, complete79.9326 %Subject ←→ Query28.6114
NC_009138:668000Herminiimonas arsenicoxydans, complete genome77.1661 %Subject ←→ Query28.6266
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome77.3192 %Subject ←→ Query28.9383
NC_009659:3520093*Janthinobacterium sp. Marseille chromosome, complete genome75.0613 %Subject ←→ Query29.6936
NC_004460:1618892Vibrio vulnificus CMCP6 chromosome II, complete sequence79.5711 %Subject ←→ Query29.7179
NC_014334:99000*Lactobacillus casei str. Zhang chromosome, complete genome75.1624 %Subject ←→ Query29.7551
NC_014966:795311Vibrio vulnificus MO6-24/O chromosome II, complete sequence81.6023 %Subject ←→ Query29.8334
NC_008322:722612Shewanella sp. MR-7, complete genome75.6679 %Subject ←→ Query30.0553
NC_004460:973738Vibrio vulnificus CMCP6 chromosome II, complete sequence82.6287 %Subject ←→ Query30.5138
NC_008321:2190000Shewanella sp. MR-4, complete genome75.6771 %Subject ←→ Query30.7271
NC_016628:133841*Vibrio furnissii NCTC 11218 chromosome 2, complete sequence77.8309 %Subject ←→ Query31.1568
NC_016945:666000Vibrio cholerae IEC224 chromosome II, complete sequence80.8517 %Subject ←→ Query31.171
NC_013198:511795Lactobacillus rhamnosus GG, complete genome75.8241 %Subject ←→ Query31.25
NC_004459:1794540*Vibrio vulnificus CMCP6 chromosome I, complete sequence81.0233 %Subject ←→ Query31.6148
NC_009654:4716417Marinomonas sp. MWYL1, complete genome75.8548 %Subject ←→ Query32.6103
NC_014334:589526Lactobacillus casei str. Zhang chromosome, complete genome75.2237 %Subject ←→ Query32.7578
NC_008577:4183361Shewanella sp. ANA-3 chromosome 1, complete sequence76.8045 %Subject ←→ Query32.7699
NC_004460:1313468Vibrio vulnificus CMCP6 chromosome II, complete sequence78.8695 %Subject ←→ Query33.3414
NC_002505:2537655*Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete91.0172 %Subject ←→ Query33.5512
NC_009457:2095366*Vibrio cholerae O395 chromosome 2, complete sequence96.6054 %Subject ←→ Query33.6492
NC_004460:1237129Vibrio vulnificus CMCP6 chromosome II, complete sequence80.7812 %Subject ←→ Query33.7123
NC_016445:2012294*Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete99.6936 %Subject ←→ Query34.3396
NC_016628:935420Vibrio furnissii NCTC 11218 chromosome 2, complete sequence82.5429 %Subject ←→ Query34.4218
NC_016445:89500Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete75.5545 %Subject ←→ Query34.6333
NC_002505:1550108Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete75.242 %Subject ←→ Query34.6547
NC_010554:2646806Proteus mirabilis HI4320, complete genome78.5846 %Subject ←→ Query35.3988
NC_016602:3122700*Vibrio furnissii NCTC 11218 chromosome 1, complete sequence78.0086 %Subject ←→ Query35.5767
NC_004459:1679335*Vibrio vulnificus CMCP6 chromosome I, complete sequence76.6115 %Subject ←→ Query35.7874
NC_012667:46432*Vibrio cholerae MJ-1236 chromosome 2, complete genome80.3002 %Subject ←→ Query35.9314
NC_016628:1Vibrio furnissii NCTC 11218 chromosome 2, complete sequence75.239 %Subject ←→ Query36.0135
NC_009456:998935*Vibrio cholerae O395 chromosome 1, complete sequence77.0895 %Subject ←→ Query36.0218
NC_008321:3964414Shewanella sp. MR-4, complete genome75.5974 %Subject ←→ Query36.1551
NC_012668:160357Vibrio cholerae MJ-1236 chromosome 1, complete sequence78.8817 %Subject ←→ Query36.6506
NC_010999:1979989*Lactobacillus casei, complete genome75.8272 %Subject ←→ Query36.6636
NC_012580:207025*Vibrio cholerae M66-2 chromosome II, complete sequence81.4461 %Subject ←→ Query36.8634
NC_014334:1775781*Lactobacillus casei str. Zhang chromosome, complete genome76.0447 %Subject ←→ Query36.9239
NC_012583:242760*Vibrio cholerae O395 chromosome chromosome II, complete sequence78.5754 %Subject ←→ Query36.9645
NC_016602:2037162*Vibrio furnissii NCTC 11218 chromosome 1, complete sequence80.0368 %Subject ←→ Query37.0927
NC_012582:2626786*Vibrio cholerae O395 chromosome chromosome I, complete sequence98.7102 %Subject ←→ Query37.0987
NC_016602:2292518Vibrio furnissii NCTC 11218 chromosome 1, complete sequence81.4216 %Subject ←→ Query37.1565
NC_016446:979884*Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete81.4154 %Subject ←→ Query37.3254
NC_002506:207097*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete81.4461 %Subject ←→ Query37.898
NC_016945:207089*Vibrio cholerae IEC224 chromosome II, complete sequence81.4614 %Subject ←→ Query38.0893
NC_004349:3938Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence77.2917 %Subject ←→ Query38.1809
NC_002505:168532Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete82.7819 %Subject ←→ Query38.3098
NC_012668:1036000Vibrio cholerae MJ-1236 chromosome 1, complete sequence87.4571 %Subject ←→ Query38.771
NC_002488:1812696Xylella fastidiosa 9a5c, complete genome76.8474 %Subject ←→ Query38.8176
NC_016602:1994110Vibrio furnissii NCTC 11218 chromosome 1, complete sequence77.6624 %Subject ←→ Query38.9184
NC_016944:2588435*Vibrio cholerae IEC224 chromosome I, complete sequence99.6262 %Subject ←→ Query39.3847
NC_016602:2854107Vibrio furnissii NCTC 11218 chromosome 1, complete sequence77.932 %Subject ←→ Query39.7191
NC_016628:537137Vibrio furnissii NCTC 11218 chromosome 2, complete sequence79.905 %Subject ←→ Query39.9714
NC_015554:4724245*Alteromonas sp. SN2 chromosome, complete genome76.2929 %Subject ←→ Query42.0329
NC_016628:1190366*Vibrio furnissii NCTC 11218 chromosome 2, complete sequence76.8719 %Subject ←→ Query42.0825
NC_016628:763833Vibrio furnissii NCTC 11218 chromosome 2, complete sequence78.6274 %Subject Query43.5211
NC_008573:195317Shewanella sp. ANA-3 plasmid 1, complete sequence75.7629 %Subject Query46.5154
NC_010611:240839Acinetobacter baumannii ACICU, complete genome78.269 %Subject Query48.2217